Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS03820 and BWI76_RS03825 are separated by 295 nucleotidesBWI76_RS03825 and BWI76_RS03830 are separated by 19 nucleotidesBWI76_RS03830 and BWI76_RS03835 are separated by 378 nucleotidesBWI76_RS03835 and BWI76_RS03840 are separated by 9 nucleotides BWI76_RS03820: BWI76_RS03820 - carbon starvation protein A, at 788,913 to 791,063 _RS03820 BWI76_RS03825: BWI76_RS03825 - 4-hydroxyphenylacetate 3-monooxygenase, at 791,359 to 791,871 _RS03825 BWI76_RS03830: BWI76_RS03830 - 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component, at 791,891 to 793,453 _RS03830 BWI76_RS03835: BWI76_RS03835 - 4-hydroxyphenylacetate catabolism regulatory protein HpaA, at 793,832 to 794,722 _RS03835 BWI76_RS03840: BWI76_RS03840 - 4-hydroxyphenylacetate permease, at 794,732 to 796,108 _RS03840
Group Condition BWI76_RS03820 BWI76_RS03825 BWI76_RS03830 BWI76_RS03835 BWI76_RS03840
ecofab LB in EcoFAB_3.5mL -0.2 -0.8 -0.3 -0.4 +0.2
phage KLEB1 MOI 10 +0.1 -1.7 -0.2 +0.0 +0.3
phage KLEB20 MOI 0.1 -0.1 -0.6 +0.2 -1.3 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 +0.7 -0.3 -1.4 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 -1.0 +0.4 -0.3 -0.4
carbon source Trisodium citrate (C) +0.3 +0.6 -0.5 -0.6 +0.0
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -0.5 -0.5 +0.5 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.2 -0.0 -0.7 +0.9 -0.2
nitrogen source L-Lysine (N) -0.1 +0.9 +0.4 -0.9 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +1.1 -0.4 -0.4 -0.3
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL -0.2 +0.9 -0.4 +0.4 +0.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.2 +0.8 -0.3 +0.6 -0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.8 +0.2 +1.3 +0.5
phage KLEB15 MOI 10 -0.0 +0.6 +0.4 -0.4 +0.6
nitrogen source Cytosine (N) +0.3 +0.7 -0.2 +0.6 -0.2
rhizosphere rhizosphere sample 1; outgrowth in LB +0.0 +0.4 +0.6 -0.5 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 +1.1 -0.3 -0.2 +0.6
agar plate interaction Taped volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.5 +0.7 -0.5 +0.2
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.5 +0.2 +0.5 +1.1 +0.0
phage K. M5a1 KLEB23 MOI 1 +0.9 +0.9 -0.2 +0.3 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 -0.0 -0.2 +1.9 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.1 -0.0 -0.2 +1.4 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +1.1 -0.6 +1.3 +0.2
phage K. M5a1 KLEB22 MOI 1 +0.6 +0.7 +0.3 +0.3 +0.1
phage K. M5a1 KLEB23 MOI 10 +0.7 +1.2 -0.2 +0.3 +0.1
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB +0.2 +0.6 -0.0 +1.0 +0.6
phage K. M5a1 KLEB22 MOI 10 +1.0 +1.2 +0.2 -0.0 +0.1
phage K. M5a1 KLEB22 MOI 1 +0.6 +0.9 +0.2 +0.7 +0.4
micoeukaryotes Tetrahymena sp., Mixed culture-1 +0.2 +0.7 +1.0 +0.4 +0.6
phage K. M5a1 KLEB23 MOI 1 +1.1 +1.5 +0.3 +0.7 +0.1
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