Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS03435	BWI76_RS03440	BWI76_RS03445	BWI76_RS03450	BWI76_RS03455
phage	K. M5a1 KLEB26 MOI 0.1	-1.1	-1.0	-0.3	-0.4	-0.0
phage	MM23	-0.8	-0.4	-0.6	-0.4	-0.4
phage	KP5_E1_R2_1	-0.8	-0.6	-0.3	-0.2	-0.3
phage	KP5_E1_R2_1	-0.9	-0.7	+0.1	+0.3	-0.2
phage	MM23	+0.0	-0.4	-0.6	-0.1	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.0	+0.0	+0.1	-0.3	+0.1
phage	K. M5a1 KLEB23 MOI 10	-0.4	-0.3	-0.5	+0.1	+0.1
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	-0.7	-0.1	+0.3	-0.1	-0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.8	+0.1	+0.3	+0.1	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	-0.5	+0.1	+0.4	-0.1
nitrogen source	Gly-DL-Asp (N)	+0.2	-0.6	+0.1	+0.2	-0.1
phage	KP2_E1_R2_1	-0.4	-0.1	+0.6	-0.5	+0.1
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	-0.1	-0.6	+0.3	+0.4	-0.2
phage	Roth35v2	-0.6	-0.2	+0.1	+0.3	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.3	-0.1	-0.1	+0.6	-0.1
phage	Roth35v2	-0.9	+0.2	+0.1	+0.5	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7	-0.2	+0.4	+0.5	+0.0
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	+0.4	-0.6	+0.2	+0.1	-0.0
phage	ER72	-0.4	+0.1	+0.6	-0.1	-0.1
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	+0.3	+0.3	-0.2	-0.4	+0.1
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	+0.4	-0.3	+0.2	-0.3	+0.1
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	+0.6	-0.4	-0.0	+0.3	-0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.1	+0.1	+0.3	+0.6	+0.2
carbon source	Gly-Glu (C)	+0.8	-0.1	+0.2	+0.1	+0.3
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+0.3	-0.0	+0.4	+0.4	+0.2
phage	KLEB17 MOI 1	+0.0	+0.0	+0.3	+0.6	+0.3
phage	KLEB20 MOI 0.1	+0.5	+0.2	+0.1	+0.2	+0.3
phage	KLEB20 MOI 0.1	+0.4	+0.2	+0.1	+0.5	+0.1
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.7	+0.1	+0.4	+0.1	+0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	+0.6	+0.2	+0.3	+0.2	+0.1