Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS03335 and BWI76_RS03340 overlap by 32 nucleotidesBWI76_RS03340 and BWI76_RS03345 are separated by 213 nucleotidesBWI76_RS03345 and BWI76_RS03350 are separated by 20 nucleotidesBWI76_RS03350 and BWI76_RS03355 are separated by 85 nucleotides BWI76_RS03335: BWI76_RS03335 - hypothetical protein, at 688,330 to 688,578 _RS03335 BWI76_RS03340: BWI76_RS03340 - hypothetical protein, at 688,547 to 689,452 _RS03340 BWI76_RS03345: BWI76_RS03345 - prophage P4 integrase, at 689,666 to 690,937 _RS03345 BWI76_RS03350: BWI76_RS03350 - putative regulatory protein, at 690,958 to 691,143 _RS03350 BWI76_RS03355: BWI76_RS03355 - hypothetical protein, at 691,229 to 692,290 _RS03355
Group Condition BWI76_RS03335 BWI76_RS03340 BWI76_RS03345 BWI76_RS03350 BWI76_RS03355
rhizosphere rhizosphere EcoFAB sample 3; outgrowth in LB -0.5 -1.1 -0.9 N.D. -1.9
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.4 -0.7 -1.3 N.D. -0.6
mixed community RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.3 -0.6 -1.1 N.D. -0.6
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.1 -0.8 -1.0 N.D. -0.8
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL -0.8 -0.4 -0.7 N.D. -0.8
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.9 -0.5 -0.5 N.D. -0.7
nitrogen source Thymine (N) -0.4 -0.0 -0.7 N.D. -1.5
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.5 -0.5 -1.0 N.D. -0.6
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.1 -0.6 -1.2 N.D. -0.6
mixed community RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.6 -0.6 -0.6 N.D. -0.8
mixed community RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.2 -0.3 -1.3 N.D. -0.7
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.5 -0.5 -0.9 N.D. -0.5
mixed community RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.3 -0.7 -0.9 N.D. -0.6
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.4 -0.5 -1.0 N.D. -0.5
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL -0.4 -0.5 -0.9 N.D. -0.5
mixed community RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.2 -0.6 -0.8 N.D. -0.7
carbon source RCH2_defined_noCarbon with Glu_DLac_Acetate_mix 1 x -0.5 -0.6 -0.5 N.D. -0.6
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.1 -0.3 -1.3 N.D. -0.7
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -0.5 -0.4 -0.7 N.D. -0.5
mixed community RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.4 -0.5 -0.6 N.D. -0.8
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL -0.1 -0.2 -1.3 N.D. -0.6
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x -0.6 -0.5 -0.5 N.D. -0.5
mixed community RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.3 -0.5 -0.7 N.D. -0.7
mixed community LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL -0.2 -0.4 -1.1 N.D. -0.5
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x -0.3 -0.4 -0.7 N.D. -0.8
mixed community RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.2 -0.7 -0.7 N.D. -0.5
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.6 -0.5 -0.5 N.D. -0.5
mixed community LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL -0.2 -0.3 -1.1 N.D. -0.4
rhizosphere rhizosphere sample 1; outgrowth in LB +0.4 -0.4 -1.0 N.D. -0.4
phage Roth35v2 +0.6 +0.8 +0.7 N.D. +0.9
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