Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS03085	BWI76_RS03090	BWI76_RS03095	BWI76_RS03100	BWI76_RS03105
carbon source	m-Inositol (C)	-2.1	-2.7	-4.2	-2.6	-2.9
carbon source	m-Inositol (C)	-2.0	-1.9	-2.9	-2.3	-2.0
supernatant	Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.2	-0.2	-0.1	-0.5	-4.6
stress	Paraquat dichloride 0.1 mg/ml	-0.0	-0.4	+0.2	-0.0	-3.5
stress	Cobalt chloride 0.5 mM	-0.3	-0.3	-0.2	+0.4	-2.6
mixed community	LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.1	+0.1	+0.3	-0.6	-2.5
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	+0.2	+0.4	-0.8	+0.9	-2.7
nitrogen source	L-Isoleucine (N)	+0.3	-0.2	-0.4	+0.1	-1.5
nitrogen source	L-Cysteine (N)	+0.1	+0.0	-0.3	+0.5	-2.1
ecofab	RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL	-0.2	+0.3	-0.4	-0.7	-0.7
micoeukaryotes	Dictyostellum sp.mixed culture-1	+0.3	-0.0	-0.4	+0.9	-2.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.1	-0.0	+0.4	-0.2	-1.7
carbon source	2-Deoxyadenosine 4 mM (C)	-0.1	+0.5	-0.9	+0.1	-1.0
nitrogen source	Thymine (N)	+0.2	-0.4	+0.7	+0.4	-2.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	-0.0	+0.0	+1.0	-1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	-0.3	+1.1	+0.4	-0.8
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.4	+0.5	-1.0	-0.2	+0.6
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml	+0.3	+0.1	-0.7	-0.2	+1.0
nitrogen source	Glucuronamide (N)	+0.1	-0.4	-0.5	+0.0	+1.2
phage	K. M5a1 KLEB10 MOI 1	+0.3	-0.1	-0.7	+0.2	+1.2
carbon source	acetate (C)	+0.1	-0.0	-0.7	+0.2	+1.3
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	+0.3	-0.2	-0.2	-0.4	+1.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6	-0.3	+1.8	+0.4	-1.4
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.2	+0.1	+0.2	+1.9	-1.2
nitrogen source	Glucuronamide (N)	+0.2	-0.0	+0.1	-0.5	+1.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	-0.2	-0.6	+0.8	+1.3
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	+0.2	-0.2	-0.2	+0.2	+1.6
mixed community	RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.2	+0.2	+0.2	-0.4	+1.5
nitrogen source	Casamino Acids (N)	+0.3	-0.4	+1.0	+0.4	+1.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	+0.2	-0.3	-0.4	+4.4