Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS03060 and BWI76_RS03065 are separated by 86 nucleotidesBWI76_RS03065 and BWI76_RS03070 are separated by 361 nucleotidesBWI76_RS03070 and BWI76_RS03075 are separated by 18 nucleotidesBWI76_RS03075 and BWI76_RS03080 are separated by 196 nucleotides BWI76_RS03060: BWI76_RS03060 - ATP-binding protein, at 626,428 to 627,930 _RS03060 BWI76_RS03065: BWI76_RS03065 - hypothetical protein, at 628,017 to 628,838 _RS03065 BWI76_RS03070: BWI76_RS03070 - Methylmalonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.27) (from data), at 629,200 to 630,705 _RS03070 BWI76_RS03075: BWI76_RS03075 - 5-deoxy-D-glucuronate isomerase (EC 5.3.1.30) (from data), at 630,724 to 631,533 _RS03075 BWI76_RS03080: BWI76_RS03080 - (Fe-S)-cluster assembly protein, at 631,730 to 632,587 _RS03080
Group Condition BWI76_RS03060 BWI76_RS03065 BWI76_RS03070 BWI76_RS03075 BWI76_RS03080
carbon source succinate (C) +0.1 -0.1 +0.0 -0.2 -5.1
carbon source succinate (C) -0.2 +0.1 +0.1 +0.0 -5.2
carbon source D-Alanine (C) -0.0 +0.1 +0.0 -0.1 -4.5
mixed community RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.2 -0.3 +0.3 -0.1 -4.1
carbon source L-Sorbose (C) +0.1 -0.0 +0.3 -0.3 -3.8
carbon source D-Alanine (C) -0.0 +0.3 +0.0 +0.2 -4.3
carbon source L-Glutamine (C) -0.1 +0.1 +0.2 +0.2 -4.1
carbon source 2'-Deoxycytidine 10 mM (C) -0.0 -0.1 +0.0 -0.1 -3.4
carbon source L-Sorbose (C) +0.1 -0.1 +0.2 -0.0 -3.5
carbon source D,L-Malic Acid (C) +0.1 +0.1 +0.0 -0.1 -3.6
carbon source D-Lactate (C) +0.1 -0.1 -0.0 +0.0 -3.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.1 -0.0 +0.1 -0.2 -2.8
carbon source L-Malic (C) +0.1 -0.3 -0.1 -0.2 -2.3
carbon source D-Lactate (C) +0.1 +0.2 +0.2 -0.0 -3.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +0.1 -0.1 +0.6 -3.3
carbon source m-Inositol (C) -0.1 +0.1 -1.4 -2.5 +1.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.4 +0.2 +0.1 -0.0 -2.3
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL -0.0 +0.0 -0.4 +0.1 -2.1
carbon source 2'-Deoxycytidine 5 mM (C) -0.0 +0.3 +0.1 -0.1 -2.8
phage KLEB30 MOI 1 -0.3 +0.1 -0.4 -0.2 -1.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.3 -0.0 +0.2 -0.1 -2.1
carbon source 2'-Deoxyinosine 5 mM (C) -0.2 +0.1 +0.6 +0.1 -2.9
carbon source m-Inositol (C) +0.1 +0.2 -1.7 -2.5 +1.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +0.0 -0.2 -0.0 -2.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 +0.4 -0.0 -0.6 -1.8
carbon source 2'-Deoxycytidine 10 mM (C) -0.0 +0.2 +0.3 -0.1 -2.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.2 +0.0 +0.3 -0.2 -1.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.1 +0.8 +0.1 -0.2 -1.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 +0.2 -0.1 +0.2 -1.7
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days +0.1 +0.2 +0.6 +0.2 -1.4
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