Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS03020	BWI76_RS03025	BWI76_RS03030	BWI76_RS03035	BWI76_RS03040
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	+0.0	N.D.	N.D.	-2.8
agar plate interaction	Taped volatile agar plate with Trichoderma atroviridae IMI	-1.9	-0.6	N.D.	N.D.	+0.1
nitrogen fixation	D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days	-0.4	-1.9	N.D.	N.D.	+0.0
supernatant control	Vogels_fungal_media; pH 5.5	-0.5	-0.9	N.D.	N.D.	-0.8
nitrogen source	L-tyrosine (N)	+0.3	-0.2	N.D.	N.D.	-1.7
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4	-1.2	N.D.	N.D.	-0.8
carbon source	D-Alanine (C)	+0.1	+0.3	N.D.	N.D.	-1.9
nitrogen source	Uridine (N)	-0.8	+0.5	N.D.	N.D.	-1.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6	+0.7	N.D.	N.D.	-1.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.9	+1.2	N.D.	N.D.	-1.0
phage	KLEB20 MOI 1	+0.3	+0.6	N.D.	N.D.	-1.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+1.4	-0.3	N.D.	N.D.	-1.5
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-1.0	+1.1	N.D.	N.D.	-0.6
phage	KLEB17 MOI 1	+0.3	+0.6	N.D.	N.D.	-1.3
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	+0.3	-1.1	N.D.	N.D.	+0.9
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.6	+1.2	N.D.	N.D.	-0.4
phage	K. M5a1 KLEB26 MOI 0.1	+1.0	+0.4	N.D.	N.D.	-0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.3	+1.1	N.D.	N.D.	-0.8
nitrogen source	L-Phenylalanine (N)	+0.4	+1.2	N.D.	N.D.	-1.0
carbon source	D-Cellobiose (C)	-0.3	+1.9	N.D.	N.D.	-0.9
phage	KLEB16 MOI 0.1	+0.5	+1.1	N.D.	N.D.	-0.8
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-0.7	+1.1	N.D.	N.D.	+0.5
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	-0.4	+0.3	N.D.	N.D.	+1.7
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	-0.8	+2.0	N.D.	N.D.	+0.4
exudates	RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x	-0.6	+1.4	N.D.	N.D.	+0.9
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and 2,2'-Dipyridyl 50 uM	-0.5	+2.4	N.D.	N.D.	+0.2
mixed community	LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL	+0.2	+0.2	N.D.	N.D.	+1.8
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x	+0.5	+0.4	N.D.	N.D.	+1.5
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	+0.3	+1.1	N.D.	N.D.	+1.1
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and 2,2'-Dipyridyl 50 uM	+0.2	+2.6	N.D.	N.D.	-0.2