Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS03000	BWI76_RS03005	BWI76_RS03010	BWI76_RS03015	BWI76_RS03020
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	N.D.	-0.3	-6.1	-0.8	-0.2
carbon source	Cytidine (C)	N.D.	-0.0	-7.7	+0.5	-0.1
carbon source	RCH2_defined_glucose with MS_media 0.5x	N.D.	-0.1	-6.2	-0.5	-0.5
stress	RCH2_defined_1percent_glucose with Chloride 100 mM and Betaine 100 uM	N.D.	+0.1	-6.0	-0.6	-0.3
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	N.D.	+0.0	-6.9	+0.1	+0.1
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	N.D.	-0.3	-6.3	-0.1	+0.0
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	N.D.	-0.1	-6.6	+0.5	-0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	-0.1	-5.6	-0.4	-0.4
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	N.D.	+0.2	-6.8	+0.2	-0.0
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	N.D.	+0.4	-6.9	-0.1	+0.2
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	N.D.	-0.4	-5.8	-0.1	-0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	-0.2	-6.3	+0.2	-0.1
nitrogen source	L-Cysteine (N)	N.D.	+0.1	-5.8	-1.4	+1.0
nitrogen source	D-Serine (N)	N.D.	-0.1	-5.7	-0.2	+0.3
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	N.D.	+0.4	-6.2	+0.1	-0.0
nitrogen source	L-Glutamine (N)	N.D.	-0.1	-6.0	-0.1	+0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	+0.4	-6.1	+0.6	-0.3
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	N.D.	+0.2	-6.0	+0.3	+0.1
nitrogen source	L-Cysteine (N)	N.D.	+0.4	-4.9	-0.9	+0.0
carbon source	Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM	N.D.	+0.1	-5.9	+0.5	+0.0
nitrogen source	Glycine (N)	N.D.	+0.0	-4.7	-1.0	+0.7
nitrogen source	Thymine (N)	N.D.	+0.2	-5.9	+0.3	+0.6
carbon source	D-Fructose (C)	N.D.	-0.0	-5.1	-0.4	+0.7
no stress control	RCH2_defined_1percent_glucose; no stress	N.D.	+0.2	-5.8	+0.1	+0.7
carbon source	D-Ribose (C)	N.D.	+0.3	-5.6	+0.2	+0.4
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	N.D.	+0.1	-5.4	+0.8	+0.0
carbon source	L-Alanine (C)	N.D.	+0.7	-5.5	+0.1	+0.4
carbon source	D-Lactate (C)	N.D.	+0.1	-5.2	+0.6	+0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	N.D.	+0.3	-4.5	+1.0	-0.9
nitrogen source	D-Alanine (N)	N.D.	-0.1	-4.8	+1.1	+0.4