Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS02840 and BWI76_RS02845 are separated by 620 nucleotidesBWI76_RS02845 and BWI76_RS02850 are separated by 94 nucleotidesBWI76_RS02850 and BWI76_RS02855 are separated by 36 nucleotidesBWI76_RS02855 and BWI76_RS02860 are separated by 419 nucleotides BWI76_RS02840: BWI76_RS02840 - methylmalonate-semialdehyde dehydrogenase (CoA acylating), at 581,049 to 582,560 _RS02840 BWI76_RS02845: BWI76_RS02845 - hypothetical protein, at 583,181 to 583,732 _RS02845 BWI76_RS02850: BWI76_RS02850 - metalloprotease PmbA, at 583,827 to 585,179 _RS02850 BWI76_RS02855: BWI76_RS02855 - cytochrome B562, at 585,216 to 585,602 _RS02855 BWI76_RS02860: BWI76_RS02860 - glycine dehydrogenase, at 586,022 to 586,360 _RS02860
Group Condition BWI76_RS02840 BWI76_RS02845 BWI76_RS02850 BWI76_RS02855 BWI76_RS02860
phage KLEB20 MOI 1 -0.2 N.D. -0.9 -0.9 -0.7
nitrogen source Thymine (N) -0.0 N.D. -0.6 -0.9 -1.1
phage KLEB17 MOI 0.1 -0.2 N.D. -0.9 -1.0 -0.5
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x +0.2 N.D. +0.1 -1.7 -0.8
nitrogen source Uridine (N) -0.0 N.D. -0.5 -1.5 -0.1
nitrogen source Thymidine (N) +0.1 N.D. -0.5 -1.6 -0.0
phage KLEB20 MOI 0.1 -0.1 N.D. -0.5 +0.1 -1.3
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x +0.0 N.D. +0.2 -1.4 -0.6
nitrogen source Cytosine (N) +0.1 N.D. +0.3 -1.5 -0.3
mixed community LB 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL +0.1 N.D. +0.2 -1.4 -0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.2 N.D. +0.1 -1.8 +0.3
mixed community LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +0.2 N.D. +0.3 -1.7 +0.1
mixed community LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL +0.3 N.D. -0.2 -1.9 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 N.D. +0.2 -1.3 -0.2
nitrogen source L-Arginine (N) +0.1 N.D. +0.5 -1.0 -0.4
stress Sisomicin 0.008 mg/ml -0.1 N.D. +0.3 -1.4 +0.5
supernatant RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and 2,2'-Dipyridyl 50 uM -0.0 N.D. -0.3 -0.8 +0.7
stress RCH2_defined_glucose with Iron (II) 0.209 mg/mL -0.1 N.D. -0.2 -0.7 +0.8
mixed community LB 0.5x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^6 spores/mL +0.2 N.D. +0.4 -1.1 +0.4
phage KLEB16 MOI 10 -0.1 N.D. +0.6 -1.0 +0.5
phage K. M5a1 KLEB26 MOI 0.1 -0.5 N.D. -0.4 +0.4 +0.7
phage KLEB15 MOI 1 +0.1 N.D. +0.5 -0.8 +1.0
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.1 N.D. +1.1 -0.8 +0.7
phage KLEB29 MOI 1 +0.2 N.D. +0.6 +0.7 -0.4
micoeukaryotes Dictyostellum sp.mixed culture-2 +0.2 N.D. -0.1 +1.5 +0.2
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.1 N.D. -0.1 +0.6 +1.3
phage K. M5a1 KLEB23 MOI 1 +0.1 N.D. +0.2 +1.0 +0.6
nitrogen fixation L-Malic (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic acid; 8 days -0.0 N.D. +0.5 -0.1 +2.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x +0.4 N.D. -0.0 +1.7 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.1 N.D. -0.1 +0.7 +3.2
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