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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS02460 and BWI76_RS02465 are separated by 119 nucleotides
BWI76_RS02465 and BWI76_RS02470 are separated by 24 nucleotides
BWI76_RS02470 and BWI76_RS02475 are separated by 93 nucleotides
BWI76_RS02475 and BWI76_RS02480 are separated by 94 nucleotides
BWI76_RS02460: BWI76_RS02460 - elongation factor P lysine(34) lysyltransferase, at 503,733 to 504,710
_RS02460
BWI76_RS02465: BWI76_RS02465 - miniconductance mechanosensitive channel MscM, at 504,830 to 508,156
_RS02465
BWI76_RS02470: BWI76_RS02470 - phosphatidylserine decarboxylase, at 508,181 to 509,143
_RS02470
BWI76_RS02475: BWI76_RS02475 - ribosome small subunit-dependent GTPase, at 509,237 to 510,298
_RS02475
BWI76_RS02480: BWI76_RS02480 - oligoribonuclease, at 510,393 to 510,938
_RS02480
Group
Condition
BWI76
_RS02460
BWI76
_RS02465
BWI76
_RS02470
BWI76
_RS02475
BWI76
_RS02480
stress
Sisomicin 0.008 mg/ml
N.D.
-0.8
N.D.
N.D.
N.D.
stress
Sisomicin 0.008 mg/ml
N.D.
-0.7
N.D.
N.D.
N.D.
mixed community
LB 0.1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
N.D.
-0.5
N.D.
N.D.
N.D.
mixed community
LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL
N.D.
-0.5
N.D.
N.D.
N.D.
mixed community
LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
N.D.
-0.5
N.D.
N.D.
N.D.
mixed community
LB 0.1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^5 spores/mL
N.D.
-0.5
N.D.
N.D.
N.D.
stress
RCH2_defined_1percent_glucose with Chloride 600 mM
N.D.
-0.5
N.D.
N.D.
N.D.
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
N.D.
-0.4
N.D.
N.D.
N.D.
phage
KP2_E1_R2_1
N.D.
-0.4
N.D.
N.D.
N.D.
nitrogen source
Glucuronamide (N)
N.D.
-0.4
N.D.
N.D.
N.D.
phage
KLEB13 MOI 0.1
N.D.
-0.4
N.D.
N.D.
N.D.
micoeukaryotes
Acanthamoeba sp., muxed culture-2
N.D.
+0.4
N.D.
N.D.
N.D.
micoeukaryotes
Dictyostellum sp.mixed culture-1
N.D.
+0.4
N.D.
N.D.
N.D.
phage
KLEB29 MOI 0.1
N.D.
+0.4
N.D.
N.D.
N.D.
phage
KLEB15 MOI 0.1
N.D.
+0.4
N.D.
N.D.
N.D.
phage
KLEB29 MOI 1
N.D.
+0.4
N.D.
N.D.
N.D.
phage
KLEB24 MOI 1
N.D.
+0.4
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+0.4
N.D.
N.D.
N.D.
phage
KLEB29 MOI 0.1
N.D.
+0.4
N.D.
N.D.
N.D.
phage
KLEB16 MOI 1
N.D.
+0.4
N.D.
N.D.
N.D.
phage
KLEB29 MOI 1
N.D.
+0.4
N.D.
N.D.
N.D.
mixed community
Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
N.D.
+0.4
N.D.
N.D.
N.D.
mixed community
RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
N.D.
+0.5
N.D.
N.D.
N.D.
phage
K. M5a1 KLEB22 MOI 10
N.D.
+0.5
N.D.
N.D.
N.D.
mixed community
RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
N.D.
+0.5
N.D.
N.D.
N.D.
phage
KLEB24 MOI 1
N.D.
+0.5
N.D.
N.D.
N.D.
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+0.5
N.D.
N.D.
N.D.
mixed community
Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
N.D.
+0.5
N.D.
N.D.
N.D.
phage
K. M5a1 KLEB26 MOI 0.1
N.D.
+0.6
N.D.
N.D.
N.D.
phage
KLEB26 MOI0.1
N.D.
+0.7
N.D.
N.D.
N.D.
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