Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS02405 and BWI76_RS02410 are separated by 159 nucleotidesBWI76_RS02410 and BWI76_RS02415 are separated by 42 nucleotidesBWI76_RS02415 and BWI76_RS02420 are separated by 70 nucleotidesBWI76_RS02420 and BWI76_RS02425 are separated by 163 nucleotides BWI76_RS02405: BWI76_RS02405 - CadC family transcriptional regulator, at 496,163 to 496,726 _RS02405 BWI76_RS02410: BWI76_RS02410 - EF-P beta-lysylation protein EpmB, at 496,886 to 497,914 _RS02410 BWI76_RS02415: BWI76_RS02415 - elongation factor P, at 497,957 to 498,523 _RS02415 BWI76_RS02420: BWI76_RS02420 - entericidin EcnAB, at 498,594 to 498,728 _RS02420 BWI76_RS02425: BWI76_RS02425 - entericidin B, at 498,892 to 499,038 _RS02425
Group Condition BWI76_RS02405 BWI76_RS02410 BWI76_RS02415 BWI76_RS02420 BWI76_RS02425
nitrogen source L-Arginine (N) -0.1 -2.9 N.D. -0.9 -0.5
nitrogen fixation D-Glucose (C) and no Nitrogen; normal Wolfe's minerals with nitroloacetic; 3 days -0.2 -3.6 N.D. -0.2 +0.2
nitrogen source Thymine (N) +0.1 -2.8 N.D. +0.3 -1.3
nitrogen source Glucuronamide (N) -0.4 -2.9 N.D. -0.5 +0.0
nitrogen source D-Alanine (N) -0.0 -2.8 N.D. -0.7 -0.2
nitrogen source Urea (N) -0.3 -3.3 N.D. -0.1 +0.0
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM -0.1 -3.9 N.D. +0.3 +0.1
nitrogen source Putrescine (N) -0.2 -3.2 N.D. -0.3 +0.1
carbon source L-Fucose (C) -0.1 -3.4 N.D. -0.1 +0.2
nitrogen source Ammonium chloride (N) -0.2 -3.2 N.D. +0.0 +0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.3 -3.0 N.D. +0.1 -0.1
stress nitrite 20 mM -0.2 -3.0 N.D. +0.2 -0.2
nitrogen source Cytidine (N) -0.2 -3.2 N.D. -0.0 +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.33x; and D-Glucose 74 mM -0.1 -3.1 N.D. -0.3 +0.3
carbon source D-Gluconic Acid (C) -0.1 -3.4 N.D. +0.1 +0.2
carbon source D-Maltose (C) -0.1 -3.2 N.D. +0.2 +0.1
carbon source D-Glucose (C) +0.1 -3.4 N.D. -0.0 +0.3
carbon source a-Cyclodextrin (C) -0.1 -3.5 N.D. +0.5 +0.1
carbon source D-Glucose 20 mM (C) -0.0 -3.3 N.D. +0.1 +0.2
supernatant LB 0.5x with Supernatant; Trichoderma harzanium TH1 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.2 -3.2 N.D. +0.6 -0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.2 -2.8 N.D. -0.2 +0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.0 -3.2 N.D. +0.0 +0.3
carbon source D,L-Malic Acid (C) -0.1 -3.0 N.D. +0.0 +0.3
lb LB +0.1 -3.2 N.D. +0.0 +0.2
nitrogen source L-Arginine (N) -0.3 -2.9 N.D. +0.6 -0.1
rhizosphere rhizosphere sample 1; outgrowth in LB -0.5 +2.7 N.D. -1.0 +0.2
stress Nickel (II) chloride 1.5 mM -0.0 +3.0 N.D. -0.6 +0.2
stress Nickel (II) chloride 1.5 mM -0.1 +3.9 N.D. -0.3 +0.2
stress Cobalt chloride 0.5 mM +0.0 +6.5 N.D. -0.5 +0.1
stress Cobalt chloride 0.5 mM -0.0 +6.3 N.D. -0.0 +0.4
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