Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS02090	BWI76_RS02095	BWI76_RS02100	BWI76_RS02105	BWI76_RS02110
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-1.2	-2.8	N.D.	+0.0	+0.1
rhizosphere	rhizosphere EcoFAB sample 3; outgrowth in LB	-1.4	-2.3	N.D.	+0.2	+0.5
carbon source	2'-Deoxycytidine 5 mM (C)	-0.8	-1.8	N.D.	-0.3	-0.1
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-0.1	-2.8	N.D.	+0.2	-0.0
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	-0.6	-2.2	N.D.	+0.2	-0.1
carbon source	acetate (C)	-0.4	-2.3	N.D.	+0.2	+0.0
carbon source	acetate (C)	+0.1	-2.1	N.D.	-0.3	-0.1
stress	Cobalt chloride 0.5 mM	-1.2	-0.3	N.D.	-0.3	-0.2
phage	KLEB1 MOI 0.1	-1.4	-0.2	N.D.	-0.2	-0.1
carbon source	D-Lactate (C)	+0.1	-2.0	N.D.	+0.1	-0.0
carbon source	2'-Deoxycytidine 10 mM (C)	+0.1	-1.7	N.D.	-0.2	+0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	-0.1	-2.2	N.D.	+0.3	+0.4
carbon source	2'-Deoxycytidine 5 mM (C)	-0.2	-1.4	N.D.	+0.1	-0.1
nitrogen source	D-Serine (N)	-1.5	+0.1	N.D.	+0.2	-0.1
micoeukaryotes	Tetrahymena sp., Mixed culture-1	-0.7	+0.4	N.D.	-0.3	-0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5	-0.6	N.D.	-0.3	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.5	-0.4	N.D.	-0.3	+0.9
stress	Sisomicin 0.008 mg/ml	-1.0	+0.1	N.D.	+0.5	+0.3
nitrogen source	Thymine (N)	+0.9	+0.1	N.D.	-0.5	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.9	-0.6	N.D.	-0.1	+0.3
nitrogen source	L-aspartic (N)	+0.7	+0.2	N.D.	-0.7	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.7	-0.0	N.D.	+1.4	-0.0
mixed community	RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	+0.7	-0.5	N.D.	+0.3	+0.3
control	NoPredeControl	+1.3	-0.2	N.D.	-0.0	-0.3
carbon source	Gly-Glu (C)	+1.8	-0.6	N.D.	-0.0	-0.0
carbon source	D-Lactate (C)	+2.1	-0.3	N.D.	+0.0	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+2.0	-0.4	N.D.	+0.1	+0.2
stress	RCH2_defined_1percent_glucose with Chloride 600 mM	+0.3	+0.1	N.D.	+2.0	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+2.0	+0.1	N.D.	+0.1	+0.2
stress	RCH2_defined_1percent_glucose with Chloride 600 mM	+1.0	+0.1	N.D.	+1.6	-0.2