Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS01525	BWI76_RS01530	BWI76_RS01535	BWI76_RS01540	BWI76_RS01545
carbon source	Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM	+0.1	-2.3	-3.1	-3.0	-1.8
supernatant control	Vogels_fungal_media; pH 5.5	+0.2	-2.6	-1.1	-4.4	-1.3
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	+0.2	-1.7	-1.8	-3.0	-2.5
carbon source	Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM	+0.0	-2.2	-1.9	-1.6	-2.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.1	-2.2	-1.7	-1.4	-2.6
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	-0.1	-2.3	-1.2	-1.2	-2.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	+0.2	-1.9	-1.9	-1.3	-2.2
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	+0.3	-1.4	-1.2	-1.5	-3.0
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	+0.1	-1.3	-1.0	-1.7	-2.2
stress	Fungal_growth_media_mCAFEs_v1 with Phosphomycin 0.01 mg/mL	+0.2	-1.8	-1.0	-2.2	-1.0
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.33x; and D-Glucose 74 mM	-0.1	-1.4	-1.3	-1.4	-1.6
stress	Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL	+0.1	-1.1	-1.4	-1.3	-1.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-0.0	-1.2	-1.8	-0.4	-1.8
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	-0.0	-0.4	-1.0	-1.1	-2.9
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	+0.3	-1.1	-1.5	-1.6	-1.5
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	-0.1	-1.2	-0.8	-1.8	-1.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 83.25 mM	+0.2	-1.2	-1.0	-2.1	-0.9
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	+0.1	-1.7	-1.3	-1.4	-0.7
stress	Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL	+0.1	-0.7	-1.5	-1.8	-1.2
stress	Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL	-0.3	-1.5	-1.2	-1.3	-0.7
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	+0.2	-1.9	-0.8	-1.5	-1.0
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM	+0.1	-0.8	-1.3	-1.5	-1.3
carbon source	RCH2_defined_glucose with MS_media 0.5x	+0.0	-1.2	-0.7	-1.4	-1.1
exudates	RCH2_defined_glucose with Brachypodium distachyon 27-day exudates 1x	+0.0	-1.4	-1.2	-1.2	-0.6
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 83.25 mM	-0.1	-1.1	-0.9	-1.2	-1.0
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma virens RS grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	+0.2	-1.0	-0.9	-1.6	-0.9
stress	RCH2_defined_1percent_glucose with Chloride 100 mM	+0.1	-0.0	-0.4	-2.4	-1.3
mixed community	LB 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	-0.1	-0.2	+0.5	-2.6	+1.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	-0.1	-0.3	+3.1	+1.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.6	-0.3	-0.1	+4.5	+0.9