Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS01215	BWI76_RS01220	BWI76_RS01225	BWI76_RS01230	BWI76_RS01235
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	-3.6	-0.5	+0.5	-0.8
mixed community	RCH2_defined_noCarbon with Mixed culture; Arthrobacter sp. AnTP99 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x	N.D.	-2.0	-0.1	-0.1	-2.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-4.2	+0.1	+0.0	+0.3
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	N.D.	-2.8	+0.2	+0.3	-1.1
supernatant	Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x	N.D.	-3.0	+0.6	+0.1	-1.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-2.6	-0.6	+0.7	-0.2
stress	Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM	N.D.	-3.5	+0.7	+0.1	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	N.D.	-2.6	-0.7	+0.2	+0.8
mixed community	RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	N.D.	-2.3	+0.5	+0.6	-0.8
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	N.D.	-2.7	-0.4	+0.3	+0.9
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	N.D.	-2.4	-0.3	+0.1	+1.3
stress	Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL	N.D.	-2.7	+1.5	+0.4	-0.4
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	N.D.	-2.7	+1.9	+0.6	-0.6
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	N.D.	-1.7	+1.5	+0.2	-0.7
rhizosphere	rhizosphere sample 1; outgrowth in LB	N.D.	-2.3	+0.4	+0.0	+1.5
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	N.D.	-2.3	+2.2	+0.1	-0.2
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	N.D.	-1.9	+2.0	+0.4	-0.5
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL	N.D.	-2.0	+3.0	+0.1	-1.0
stress	Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL	N.D.	-2.8	+3.2	+0.3	-0.6
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	N.D.	-2.1	+1.5	+0.1	+1.0
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	N.D.	-1.6	+1.9	+0.4	-0.1
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	N.D.	-1.3	+2.2	+0.2	-0.4
stress	Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL	N.D.	-1.6	+2.5	-0.2	+0.1
stress	Fungal_growth_media_mCAFEs_v1 with Zinc 2 mM	N.D.	-1.4	+1.9	+0.3	+0.6
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	N.D.	-2.0	+2.6	+0.8	+0.4
mixed community	Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL	N.D.	-1.2	+2.8	+0.3	+0.0
mixed community	Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^4 spores/mL	N.D.	-1.5	+2.6	+0.6	+0.6
stress	Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL	N.D.	-0.9	+2.9	+0.4	+0.3
stress	Cobalt chloride 0.5 mM	N.D.	-0.1	+5.9	+0.7	-1.2
stress	Cobalt chloride 0.5 mM	N.D.	+0.3	+5.7	+0.4	+0.4