Fitness for 5 genes in Klebsiella michiganensis M5al

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500 ntBWI76_RS00885 and BWI76_RS00890 are separated by 364 nucleotidesBWI76_RS00890 and BWI76_RS00895 overlap by 56 nucleotidesBWI76_RS00895 and BWI76_RS00900 overlap by 20 nucleotidesBWI76_RS00900 and BWI76_RS00905 are separated by 126 nucleotides BWI76_RS00885: BWI76_RS00885 - tRNA (uridine(54)-C5)-methyltransferase TrmA, at 181,984 to 183,084 _RS00885 BWI76_RS00890: BWI76_RS00890 - vitamin B12/cobalamin outer membrane transporter, at 183,449 to 185,317 _RS00890 BWI76_RS00895: BWI76_RS00895 - glutamate racemase, at 185,262 to 186,116 _RS00895 BWI76_RS00900: BWI76_RS00900 - hypothetical protein, at 186,097 to 186,364 _RS00900 BWI76_RS00905: BWI76_RS00905 - 16S ribosomal RNA, at 186,491 to 188,044 _RS00905
Group Condition BWI76_RS00885 BWI76_RS00890 BWI76_RS00895 BWI76_RS00900 BWI76_RS00905
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -1.2 -0.4 N.D. N.D. N.D.
stress Cobalt chloride 0.5 mM -1.6 +0.2 N.D. N.D. N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.8 -0.3 N.D. N.D. N.D.
stress Cobalt chloride 0.5 mM -1.2 -0.0 N.D. N.D. N.D.
supernatant Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml -1.0 -0.1 N.D. N.D. N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.8 -0.4 N.D. N.D. N.D.
carbon source D-Lactate (C) -0.9 -0.2 N.D. N.D. N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.7 -0.4 N.D. N.D. N.D.
nitrogen source Glycine (N) +0.3 -1.4 N.D. N.D. N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Dyella japonica UNC79MFTsu3.2 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x -0.4 -0.7 N.D. N.D. N.D.
micoeukaryotes Dictyostellum sp.mixed culture-2 -1.3 +0.3 N.D. N.D. N.D.
stress Nickel (II) chloride 1.5 mM -0.9 +0.3 N.D. N.D. N.D.
carbon source Inosine (C) +0.8 -0.5 N.D. N.D. N.D.
phage KLEB17 MOI 1 +0.8 -0.5 N.D. N.D. N.D.
mixed community RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x +0.7 -0.4 N.D. N.D. N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.8 -0.4 N.D. N.D. N.D.
nitrogen source Uridine (N) -0.3 +1.2 N.D. N.D. N.D.
nitrogen source Glucuronamide (N) +1.0 -0.2 N.D. N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.6 N.D. N.D. N.D.
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL +1.2 -0.1 N.D. N.D. N.D.
stress Fungal_growth_media_mCAFEs_v1 with Carbenicillin 0.008 mg/mL +1.2 -0.1 N.D. N.D. N.D.
stress Fungal_growth_media_mCAFEs_v1 with Vancomycin 0.01 mg/mL +0.9 +0.3 N.D. N.D. N.D.
stress Fungal_growth_media_mCAFEs_v1 with Thallium(I) acetate 0.05 mg/mL +1.1 +0.2 N.D. N.D. N.D.
ecofab RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL +1.5 -0.1 N.D. N.D. N.D.
mixed community Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL +1.2 +0.3 N.D. N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.7 -0.1 N.D. N.D. N.D.
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL +1.4 +0.2 N.D. N.D. N.D.
mixed community Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL +1.3 +0.3 N.D. N.D. N.D.
nitrogen source Uridine (N) +0.8 +0.9 N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +2.0 -0.2 N.D. N.D. N.D.
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