Fitness for 5 genes in Klebsiella michiganensis M5al

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BWI76_RS00800	BWI76_RS00805	BWI76_RS00810	BWI76_RS00815	BWI76_RS00820
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM	-0.2	-9.1	-0.1	+0.3	-0.6
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	+0.2	-9.6	+0.1	-0.3	+0.0
nitrogen source	L-Arginine (N)	-1.0	-8.5	-0.2	+0.1	-0.0
carbon source	Mix of RCH2_defined_noCarbon and Fungal_growth_media_mCAFEs_v1_noCarbon; D-Glucose at 55.5 mM	+0.0	-9.4	+0.1	+0.2	-0.4
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.3	-9.2	+0.1	-0.1	+0.1
nitrogen source	nitrate (N)	+0.1	-8.7	-0.4	-0.0	+0.1
nitrogen source	D-Serine (N)	-0.2	-8.8	-0.1	+0.1	+0.1
supernatant control	Vogels_fungal_media; pH 5.5	+0.2	-8.5	-0.1	-0.4	-0.1
nitrogen source	Uridine (N)	-0.0	-8.6	+0.4	-0.4	-0.1
nitrogen source	Gly-DL-Asp (N)	-0.3	-8.7	+0.2	+0.1	-0.0
nitrogen source	L-aspartic (N)	-0.1	-8.7	+0.3	-0.2	+0.1
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 20mM	+0.3	-9.1	+0.2	-0.1	+0.1
carbon source	D-Glucose 20 mM (C)	-0.3	-7.6	+0.1	-0.4	-0.2
nitrogen source	Gly-DL-Asp (N)	-0.1	-8.0	+0.2	-0.1	-0.5
nitrogen source	D-Serine (N)	-0.5	-8.3	+0.1	+0.1	+0.2
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x	+0.1	-8.7	+0.4	+0.2	-0.1
nitrogen source	D-Alanine (N)	+0.2	-8.3	-0.0	+0.2	+0.0
carbon source	D-Xylose (C)	+0.4	-7.9	-0.0	+0.2	-0.5
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.1	-8.2	+0.3	-0.0	+0.5
carbon source	D-Trehalose (C)	+0.0	-7.6	+0.1	-0.4	+0.4
exudates	RCH2_defined_glucose with Brachypodium distachyon 13-day exudates 1x	+0.1	-8.0	-0.0	+0.3	+0.2
carbon source	D-Sorbitol (C)	+0.3	-7.6	-0.0	-0.4	+0.3
carbon source	L-Sorbose (C)	+0.5	-7.7	-0.1	+0.4	-0.3
nitrogen source	Glycine (N)	-0.7	-6.9	-0.1	-0.2	+0.6
carbon source	D,L-Lactate (C)	+0.2	-7.7	-0.0	+0.2	+0.2
carbon source	Inosine (C)	+0.3	-7.7	+0.1	-0.0	+0.2
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.25x; and D-Glucose 20mM	+0.3	-7.7	+0.2	+0.0	+0.2
mixed community	RCH2_defined_noCarbon with Mixed culture; Sinorhizobium meliloti 1021 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x	+0.7	-8.3	+0.3	+0.3	+0.2
carbon source	D-Glucose-6-Phosphate (C)	+0.4	-7.6	+0.1	+0.1	+0.3
carbon source	D-Gluconic Acid (C)	+0.7	-7.5	+0.1	-0.1	+0.3