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Fitness for 5 genes in
Klebsiella michiganensis M5al
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500 nt
BWI76_RS00395 and BWI76_RS00400 are separated by 57 nucleotides
BWI76_RS00400 and BWI76_RS00405 are separated by 215 nucleotides
BWI76_RS00405 and BWI76_RS00410 overlap by 48 nucleotides
BWI76_RS00410 and BWI76_RS00415 are separated by 133 nucleotides
BWI76_RS00395: BWI76_RS00395 - hypothetical protein, at 83,297 to 83,476
_RS00395
BWI76_RS00400: BWI76_RS00400 - glutamine synthetase, at 83,534 to 84,943
_RS00400
BWI76_RS00405: BWI76_RS00405 - hypothetical protein, at 85,159 to 85,369
_RS00405
BWI76_RS00410: BWI76_RS00410 - translational GTPase TypA, at 85,322 to 87,145
_RS00410
BWI76_RS00415: BWI76_RS00415 - glucose-1-phosphatase, at 87,279 to 87,878
_RS00415
Group
Condition
BWI76
_RS00395
BWI76
_RS00400
BWI76
_RS00405
BWI76
_RS00410
BWI76
_RS00415
nitrogen source
Urea (N)
N.D.
-4.9
N.D.
N.D.
-0.7
supernatant
Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
N.D.
-4.9
N.D.
N.D.
-0.6
nitrogen source
L-Phenylalanine (N)
N.D.
-4.8
N.D.
N.D.
-0.7
nitrogen source
L-Lysine (N)
N.D.
-4.9
N.D.
N.D.
-0.6
nitrogen source
L-Histidine (N)
N.D.
-5.2
N.D.
N.D.
-0.3
nitrogen source
Uridine (N)
N.D.
-4.9
N.D.
N.D.
-0.5
nitrogen fixation control
D-Glucose (C) with ammonium chloride; anaerobic; 8 days
N.D.
-5.5
N.D.
N.D.
+0.1
nitrogen source
Ammonium chloride (N)
N.D.
-5.1
N.D.
N.D.
-0.3
supernatant
RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x; and Iron (II) 0.209 mg/mL
N.D.
-4.9
N.D.
N.D.
-0.4
nitrogen source
Inosine (N)
N.D.
-5.0
N.D.
N.D.
-0.3
nitrogen source
nitrate (N)
N.D.
-5.4
N.D.
N.D.
+0.2
stress
RCH2_defined_glucose with 2,2'-Dipyridyl 200 uM
N.D.
-5.0
N.D.
N.D.
-0.2
nitrogen source
L-Cysteine (N)
N.D.
-5.0
N.D.
N.D.
-0.2
nitrogen source
L-Leucine (N)
N.D.
-5.0
N.D.
N.D.
-0.2
nitrogen source
L-Leucine (N)
N.D.
-5.1
N.D.
N.D.
+0.1
nitrogen source
RCH2_defined_Glucose_noNitrogen in Eppendorf tube with 0.1 mM glass beads
N.D.
-5.0
N.D.
N.D.
+0.2
nitrogen source
L-Alanine (N)
N.D.
-5.1
N.D.
N.D.
+0.3
nitrogen source
Parabanic Acid (N)
N.D.
-5.1
N.D.
N.D.
+0.3
nitrogen source
Parabanic Acid (N)
N.D.
-5.0
N.D.
N.D.
+0.3
carbon source
D-Glucose 40 mM (C)
N.D.
-5.0
N.D.
N.D.
+0.3
nitrogen source
N-Acetyl-D-glucosamine (N)
N.D.
-5.0
N.D.
N.D.
+0.3
nitrogen source
L-Phenylalanine (N)
N.D.
-5.1
N.D.
N.D.
+0.4
stress
RCH2_defined_glucose with Iron (II) 0.4266 mg/mL
N.D.
-5.0
N.D.
N.D.
+0.3
carbon source
D-Glucose 80 mM (C)
N.D.
-5.0
N.D.
N.D.
+0.3
nitrogen source
Ammonium chloride (N)
N.D.
-5.0
N.D.
N.D.
+0.4
nitrogen source
L-Proline (N)
N.D.
-5.0
N.D.
N.D.
+0.4
nitrogen source
Cytidine (N)
N.D.
-4.9
N.D.
N.D.
+0.4
nitrogen source
Thymidine (N)
N.D.
-4.8
N.D.
N.D.
+0.6
nitrogen source
Glucuronamide (N)
N.D.
-4.8
N.D.
N.D.
+0.8
nitrogen source
Uridine (N)
N.D.
-4.9
N.D.
N.D.
+1.1
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