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Fitness for 5 genes in
Klebsiella michiganensis M5al
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BWI76_RS00320 and BWI76_RS00325 are separated by 124 nucleotides
BWI76_RS00325 and BWI76_RS00330 overlap by 4 nucleotides
BWI76_RS00330 and BWI76_RS00335 are separated by 71 nucleotides
BWI76_RS00335 and BWI76_RS00340 are separated by 75 nucleotides
BWI76_RS00320: BWI76_RS00320 - 5S ribosomal RNA, at 69,472 to 69,587
_RS00320
BWI76_RS00325: BWI76_RS00325 - molybdopterin-guanine dinucleotide biosynthesis protein MobB, at 69,712 to 70,218
_RS00325
BWI76_RS00330: BWI76_RS00330 - molybdenum cofactor guanylyltransferase, at 70,215 to 70,796
_RS00330
BWI76_RS00335: BWI76_RS00335 - hypothetical protein, at 70,868 to 71,137
_RS00335
BWI76_RS00340: BWI76_RS00340 - stress response kinase A, at 71,213 to 72,199
_RS00340
Group
Condition
BWI76
_RS00320
BWI76
_RS00325
BWI76
_RS00330
BWI76
_RS00335
BWI76
_RS00340
micoeukaryotes
Dictyostellum sp.mixed culture-1
N.D.
-0.7
-0.8
-0.9
-0.0
phage
KLEB1 MOI 10
N.D.
-0.6
-0.9
-0.8
-0.2
ecofab
RCH2_defined_Glucose_noNitrogen in EcoFAB_3.5mL
N.D.
-0.7
-0.3
-1.1
+0.2
nitrogen source
L-Phenylalanine (N)
N.D.
-0.1
+0.7
-1.3
+0.0
mixed community
Fungal_growth_media_mCAFEs_v1 1x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
N.D.
-0.0
+0.7
-1.5
+0.3
stress
Cobalt chloride 0.5 mM
N.D.
-0.6
+0.1
-0.9
+1.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.9
+1.4
-0.2
-0.2
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.8
+1.4
-0.5
+0.1
stress
Sisomicin 0.008 mg/ml
N.D.
-0.3
+1.6
-0.9
-0.1
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
-0.4
-0.3
+1.1
+0.4
mixed community
Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^5 spores/mL
N.D.
+0.5
+1.1
-0.5
+0.3
supernatant
RCH2_defined_noCarbon with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
N.D.
+0.7
+0.3
-0.5
+0.8
nitrogen source
L-Citrulline (N)
N.D.
+0.3
+0.9
+0.5
-0.3
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
-0.4
+1.8
+0.1
+0.2
nitrogen source
Thymidine (N)
N.D.
+0.7
+0.8
+0.7
-0.3
mixed community
RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x
N.D.
+0.5
-0.1
+1.2
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant
N.D.
+0.0
-0.7
+2.2
+0.4
nitrogen source
L-Threonine (N)
N.D.
+0.3
+1.5
+0.3
-0.1
nitrogen source
Thymine (N)
N.D.
+0.4
+2.1
-0.7
+0.2
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.0
+1.4
-0.3
+1.0
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+0.9
+1.2
-0.7
+0.8
stress
Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM
N.D.
+1.4
+0.3
+0.1
+0.3
nitrogen source
Thymidine (N)
N.D.
+0.3
+1.2
+0.5
+0.1
stress
Sisomicin 0.008 mg/ml
N.D.
-0.2
+2.1
-0.2
+0.5
mixed community
Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL
N.D.
+0.5
+1.0
+0.7
+0.1
agar plate interaction control
Parafilmed volatile agar plate with no fungus
N.D.
+1.3
+1.3
+0.3
-0.3
stress
Fungal_growth_media_mCAFEs_v1 with nitrate 20 mM
N.D.
+1.9
+0.2
-0.1
+0.8
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
N.D.
+0.8
+3.4
-0.1
-0.2
stress
perchlorate 100 mM
N.D.
+0.2
+7.1
-0.7
+0.1
stress
perchlorate 100 mM
N.D.
-0.0
+6.9
+0.2
+0.1
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