Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS36470 and BPHYT_RS36475 are separated by 431 nucleotidesBPHYT_RS36475 and BPHYT_RS36480 are separated by 124 nucleotidesBPHYT_RS36480 and BPHYT_RS36485 are separated by 65 nucleotidesBPHYT_RS36485 and BPHYT_RS36490 are separated by 242 nucleotides BPHYT_RS36470: BPHYT_RS36470 - hypothetical protein, at 103,926 to 104,846 _RS36470 BPHYT_RS36475: BPHYT_RS36475 - hypothetical protein, at 105,278 to 105,775 _RS36475 BPHYT_RS36480: BPHYT_RS36480 - hypothetical protein, at 105,900 to 106,565 _RS36480 BPHYT_RS36485: BPHYT_RS36485 - hypothetical protein, at 106,631 to 107,155 _RS36485 BPHYT_RS36490: BPHYT_RS36490 - hypothetical protein, at 107,398 to 107,589 _RS36490
Group Condition BPHYT_RS36470 BPHYT_RS36475 BPHYT_RS36480 BPHYT_RS36485 BPHYT_RS36490
phage 24hr PHYTO9 MOI 10 -2.2 -0.3 -0.1 -2.3 N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -2.9 -0.6 -0.0 +0.2 N.D.
phage 36hr PHYTO3 MOI 1 -2.8 +0.1 -0.3 -0.0 N.D.
carbon source Suberic (C) -1.9 -0.6 -0.1 -0.4 N.D.
nitrogen source L-Isoleucine (N) -0.6 +0.2 -2.4 +0.0 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -0.4 -1.2 -0.5 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -0.2 -0.9 -0.9 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.8 +0.1 -0.5 -0.3 N.D.
phage P. phyto PHYTO2 MOI 1 -3.3 +0.4 +0.3 +0.2 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.3 +1.0 +0.3 -0.3 N.D.
nitrogen source Putrescine (N) +0.1 -0.3 -2.0 -0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.2 -0.5 -1.0 -0.5 N.D.
phage 24hr PHYTO2 MOI 1 -0.3 +0.5 -0.4 -1.6 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.7 -0.6 +0.4 +0.0 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -2.3 +0.1 +0.0 +0.4 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 -0.3 -1.0 -0.7 N.D.
carbon source Phenylacetic 5 mM (C) -0.8 -0.1 -1.0 +0.4 N.D.
phage 36hr PHYTO1 MOI 1 -1.3 -0.0 -0.5 +0.6 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB +0.8 -0.3 -1.8 +0.6 N.D.
phage 36hr PHYTO2 MOI 1 -1.0 -0.8 +0.6 +0.4 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -1.5 -0.0 +1.0 -0.0 N.D.
phage 24hr PHYTO11 MOI 0.1 -0.7 +0.4 +0.6 -0.8 N.D.
supernatant control Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB +0.8 -0.3 -1.2 +0.3 N.D.
nitrogen source L-Lysine (N) +0.8 +0.3 -1.3 -0.0 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.2 -0.1 -1.7 +0.5 N.D.
phage 36hr PHYTO10 MOI 10 +0.6 +0.1 +0.6 -1.2 N.D.
vitamin With vitamins t1 -0.6 +0.2 +1.0 -0.5 N.D.
nophagecontrol 36hr Phyto Lib Only +1.3 +0.0 -0.8 -0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.4 +0.2 +0.7 -0.4 N.D.
phage 24hr PHYTO3 MOI 10 +1.7 +0.5 +0.3 -0.5 N.D.
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BPHYT_RS36475
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