Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS36410 and BPHYT_RS36415 overlap by 11 nucleotidesBPHYT_RS36415 and BPHYT_RS36420 are separated by 514 nucleotidesBPHYT_RS36420 and BPHYT_RS36425 are separated by 377 nucleotidesBPHYT_RS36425 and BPHYT_RS36430 are separated by 178 nucleotides BPHYT_RS36410: BPHYT_RS36410 - integrase family protein, at 94,993 to 96,930 _RS36410 BPHYT_RS36415: BPHYT_RS36415 - hypothetical protein, at 96,920 to 97,381 _RS36415 BPHYT_RS36420: BPHYT_RS36420 - hypothetical protein, at 97,896 to 98,369 _RS36420 BPHYT_RS36425: BPHYT_RS36425 - hypothetical protein, at 98,747 to 99,136 _RS36425 BPHYT_RS36430: BPHYT_RS36430 - hypothetical protein, at 99,315 to 99,608 _RS36430
Group Condition BPHYT_RS36410 BPHYT_RS36415 BPHYT_RS36420 BPHYT_RS36425 BPHYT_RS36430
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.1 -1.4 -0.8 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.3 -0.9 -1.0 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -0.7 -1.0 N.D. N.D.
nitrogen source L-Glutamic (N) -0.3 -1.1 -0.6 N.D. N.D.
nitrogen source L-Asparagine (N) -0.4 -0.8 -0.6 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.1 -0.7 -1.0 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.2 -0.6 -1.0 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 +0.2 -1.4 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.2 -0.8 -0.6 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -0.7 -0.4 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.1 -0.5 -0.9 N.D. N.D.
nitrogen source Putrescine (N) -0.5 -0.7 -0.3 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.2 -0.5 -0.7 N.D. N.D.
phage 24hr PHYTO1 MOI 10 -0.2 +0.2 -1.1 N.D. N.D.
phage 36hr PHYTO10 MOI 10 -0.3 +0.3 -0.9 N.D. N.D.
carbon source succinate (C) -0.1 +0.4 -1.1 N.D. N.D.
phage 24hr PHYTO3 MOI 10 -0.0 +0.4 -1.1 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.1 +0.5 -0.9 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 +0.5 -0.8 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.3 +0.7 -0.8 N.D. N.D.
phage 24hr PHYTO3 MOI 1 +0.2 +0.9 -1.1 N.D. N.D.
phage P. phyto corn MOI 0.1 +0.2 -0.7 +0.6 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +0.6 -1.2 N.D. N.D.
nophagecontrol 36hr Phyto Lib only +0.3 +0.7 -0.5 N.D. N.D.
phage 36hr PHYTO8 MOI 0.1 +0.3 +1.0 -0.3 N.D. N.D.
carbon source Disodium Glutarate (C) +0.0 -0.3 +1.4 N.D. N.D.
carbon source Disodium Glutarate (C) +0.0 -0.2 +1.6 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.9 +0.0 +1.5 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.1 +0.1 +1.8 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.9 +0.1 +2.2 N.D. N.D.
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