Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS36020 and BPHYT_RS36025 are separated by 150 nucleotidesBPHYT_RS36025 and BPHYT_RS36030 are separated by 50 nucleotidesBPHYT_RS36030 and BPHYT_RS36035 are separated by 44 nucleotidesBPHYT_RS36035 and BPHYT_RS36040 are separated by 24 nucleotides BPHYT_RS36020: BPHYT_RS36020 - hypothetical protein, at 34,335 to 34,571 _RS36020 BPHYT_RS36025: BPHYT_RS36025 - hypothetical protein, at 34,722 to 35,090 _RS36025 BPHYT_RS36030: BPHYT_RS36030 - hypothetical protein, at 35,141 to 35,560 _RS36030 BPHYT_RS36035: BPHYT_RS36035 - hypothetical protein, at 35,605 to 36,003 _RS36035 BPHYT_RS36040: BPHYT_RS36040 - hypothetical protein, at 36,028 to 36,657 _RS36040
Group Condition BPHYT_RS36020 BPHYT_RS36025 BPHYT_RS36030 BPHYT_RS36035 BPHYT_RS36040
phage 36hr PHYTO7 MOI 1 N.D. -0.3 -0.5 -2.8 -0.4
phage P. phyto corn MOI 1 N.D. -1.1 -0.3 -1.9 +0.1
phage 36hr PHYTO8 MOI 10 N.D. -0.9 -0.6 -1.1 -0.6
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days N.D. -0.9 -0.3 -1.6 -0.3
phage 24hr PHYTO11 MOI 0.1 N.D. -0.9 -0.4 -0.9 -0.8
temperature LB 37C N.D. -1.8 -0.8 -0.4 +0.2
phage 24hr PHYTO8 MOI 1 N.D. -0.8 -0.1 -0.6 -1.4
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.8 -0.3 -1.2 -0.4
phage P. phyto PHYTO2 MOI 1 N.D. -1.4 +0.3 -1.5 -0.1
phage 36hr PHYTO4 MOI 0.1 N.D. -0.1 -0.8 -1.5 -0.3
phage 36hr PHYTO4 MOI 1 N.D. -0.2 -0.7 -1.2 -0.6
phage 24hr PHYTO6 MOI 1 N.D. -0.7 -0.3 -0.8 -0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days N.D. -0.5 -0.2 -1.1 -0.7
phage 24hr PHYTO4 MOI 10 N.D. -1.4 -0.0 -1.1 +0.0
motility outer cut, LB soft agar motility assay N.D. -1.5 -0.9 -0.5 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.3 -0.7 -1.8 -0.2
motility outer cut, LB soft agar motility assay N.D. -1.4 -1.2 +0.4 -0.1
supernatant control Vogels_fungal_media 0.1X N.D. -0.5 +0.8 -1.3 -0.9
phage 36hr PHYTO MOI 0.1 N.D. -0.5 -0.9 -0.9 +0.6
motility inner cut, LB soft agar motility assay N.D. -1.0 -0.6 +0.5 -0.5
supernatant control Vogels_fungal_media; pH 5.5 N.D. -1.5 -0.5 +0.6 +0.1
temperature LB, 37C N.D. -1.5 -0.8 +0.5 +0.5
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days N.D. -0.6 +0.1 -0.9 +0.8
phage P. phyto PHYTO2 MOI 0.1 N.D. -1.9 +0.2 +0.6 +0.5
phage 36hr PHYTO6 MOI 10 N.D. -0.9 -0.5 +0.7 +0.5
phage P. phyto PHYTO2 MOI 1 N.D. -1.4 +0.0 +1.0 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.9 +0.3 -1.0 +0.5
carbon source succinate (C) N.D. +0.7 +0.6 -0.5 +1.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant N.D. -0.3 +0.9 +0.5 +0.8
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X N.D. +0.2 +0.5 +1.8 -0.1
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