Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS34735	BPHYT_RS34740	BPHYT_RS34745	BPHYT_RS34750	BPHYT_RS34755
phage	24hr PHYTO9 MOI 0.1	-0.4	+0.0	-2.3	-0.3	-0.1
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.5	-0.4	-1.8	+0.1	-0.1
nitrogen source	NAG (N)	-0.2	-0.3	-2.0	+0.0	-0.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.2X; growth supplemented with 0.4X LB	-0.2	-0.1	-1.8	-0.2	-0.1
phage	24hr PHYTO2 MOI 0.1	-0.2	-0.1	-1.9	+0.1	-0.2
supernatant control	Vogels_fungal_media 0.1X	-0.4	-0.4	-0.7	-0.3	-0.5
phage	24hr PHYTO8 MOI 1	-0.2	+0.0	-2.3	+0.0	+0.1
supernatant control	Vogels_fungal_media 0.1X	-0.6	-0.6	-0.7	-0.2	-0.1
phage	36hr PHYTO11 MOI 0.1	+0.0	-0.4	-1.9	-0.0	+0.1
nophagecontrol	24hr Phyto Lib only	+0.1	+0.4	-2.3	-0.0	-0.1
phage	24hr PHYTO11 MOI 1	-0.0	+0.4	-2.1	-0.1	-0.1
phage	36hr PHYTO1 MOI 10	-0.0	+0.1	-1.8	-0.1	+0.0
phage	36hr PHYTO2 MOI 1	+0.1	-0.2	-1.8	-0.0	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.6	+0.4	-1.5	+0.1	+0.2
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-0.7	+0.5	-1.1	-0.2	+0.0
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	+0.1	-1.6	-0.0	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.0	+0.7	-1.4	-0.1	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.3	+0.4	-1.4	+0.1	+0.3
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+0.2	+1.5	-1.9	-0.0	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.3	+1.0	-0.7	+0.1	-0.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	-0.3	+0.2	+1.0	-0.2	-0.4
nitrogen source	L-Glutamic (N)	+0.1	-0.6	+1.3	+0.0	-0.4
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	+0.2	+1.2	-0.6	-0.0	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.0	+0.6	-0.6	+0.8	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	+0.3	+1.7	+0.3	-0.0
in planta	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1	+0.3	+0.6	+1.2	+0.1	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	+0.5	+1.0	+0.4	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	+0.7	+0.6	+0.7	+0.1
carbon source	adipate (C)	+0.2	+0.6	+1.8	-0.1	+0.1
carbon source	Sebacic (C)	+0.4	+0.5	+1.8	+0.0	+0.1