Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS34015	BPHYT_RS34020	BPHYT_RS34025	BPHYT_RS34030	BPHYT_RS34035
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+0.2	+0.1	-1.5	-0.0	-2.3
carbon source	Dodecandioic (C)	+0.0	-0.4	-0.3	-0.4	-1.9
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	-0.1	+0.1	-0.0	+0.0	-2.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB	-0.3	+0.1	+0.2	-0.6	-2.1
carbon source	2-Deoxy-D-ribonic lithium salt (C)	-0.2	-0.5	-0.3	+0.7	-1.1
nophagecontrol	24hr Phyto Lib only	-0.4	-0.2	+0.5	+0.1	-1.5
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-0.2	+0.3	+0.1	+0.6	-2.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.3	+0.5	-1.2	-0.6	+0.5
phage	36hr PHYTO2 MOI 1	+0.2	-0.9	-1.9	+0.3	+1.2
phage	36hr PHYTO11 MOI 1	-0.1	-0.8	+1.1	-0.5	-0.4
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB	-0.2	-0.5	-1.1	+1.0	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.1	+0.2	-1.2	-0.3	+1.0
phage	24hr PHYTO2 MOI 1	-0.1	-0.4	+0.9	-0.9	+0.5
phage	36hr PHYTO11 MOI 0.1	-0.4	-0.8	+1.1	-0.3	+0.2
carbon source	Suberic (C)	-0.2	+0.3	-1.2	+0.1	+0.9
phage	36hr PHYTO11 MOI 0.1	-0.2	+0.3	+0.7	-1.1	+0.3
phage	24hr PHYTO6 MOI 0.1	+0.2	-0.6	+0.9	-0.7	+0.4
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+0.0	-0.4	-0.9	+1.6	+0.0
phage	36hr PHYTO1 MOI 10	-0.4	-0.5	+1.2	-0.6	+0.8
nophagecontrol	36hr Phyto Lib only	-0.3	-0.4	+1.0	-0.2	+0.7
phage	36hr PHYTO9 MOI 0.1	-0.3	-0.0	+2.1	-1.2	+0.4
phage	36hr PHYTO1 MOI 1	-0.5	-0.4	+0.8	+0.2	+0.9
phage	24hr PHYTO10 MOI 1	-0.2	-0.5	+1.2	-0.4	+1.1
phage	36hr PHYTO3 MOI 1	-0.1	-0.6	+1.1	-0.2	+1.1
temperature	LB 37C	-0.2	-0.0	+0.6	-0.2	+1.5
phage	36hr PHYTO10 MOI 1	-0.1	-0.3	+0.9	-0.2	+1.4
phage	24hr PHYTO4 MOI 10	-0.2	-0.7	+1.6	+0.6	+0.8
phage	36hr PHYTO4 MOI 1	-0.5	-0.1	+1.1	+0.3	+1.2
in planta	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1	-0.3	+0.3	-0.2	+0.6	+2.7
carbon source	Malonic (C)	-0.3	+0.2	+1.0	+1.3	+0.8