Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS33920 and BPHYT_RS33925 are separated by 91 nucleotidesBPHYT_RS33925 and BPHYT_RS33930 are separated by 1 nucleotidesBPHYT_RS33930 and BPHYT_RS33935 are separated by 24 nucleotidesBPHYT_RS33935 and BPHYT_RS33940 are separated by 4 nucleotides BPHYT_RS33920: BPHYT_RS33920 - type II citrate synthase, at 3,202,393 to 3,203,694 _RS33920 BPHYT_RS33925: BPHYT_RS33925 - hypothetical protein, at 3,203,786 to 3,204,058 _RS33925 BPHYT_RS33930: BPHYT_RS33930 - succinate dehydrogenase iron-sulfur subunit, at 3,204,060 to 3,204,764 _RS33930 BPHYT_RS33935: BPHYT_RS33935 - succinate dehydrogenase flavoprotein subunit, at 3,204,789 to 3,206,564 _RS33935 BPHYT_RS33940: BPHYT_RS33940 - succinate dehydrogenase, at 3,206,569 to 3,206,937 _RS33940
Group Condition BPHYT_RS33920 BPHYT_RS33925 BPHYT_RS33930 BPHYT_RS33935 BPHYT_RS33940
carbon source Tween 20 (C) -6.2 N.D. N.D. N.D. N.D.
nitrogen source L-Alanine (N) -5.7 N.D. N.D. N.D. N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -5.6 N.D. N.D. N.D. N.D.
carbon source L-Phenylalanine (C) -5.4 N.D. N.D. N.D. N.D.
nitrogen source L-Asparagine (N) -5.0 N.D. N.D. N.D. N.D.
nitrogen source D-Alanine (N) -4.9 N.D. N.D. N.D. N.D.
carbon source L-Alanine (C) -4.9 N.D. N.D. N.D. N.D.
carbon source L-Tryptophan (C) -4.7 N.D. N.D. N.D. N.D.
carbon source pyruvate (C) -4.6 N.D. N.D. N.D. N.D.
vitamin No vitamins t2 -4.5 N.D. N.D. N.D. N.D.
supernatant control Vogels_fungal_media 0.1X -4.5 N.D. N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -4.5 N.D. N.D. N.D. N.D.
carbon source L-Asparagine (C) -4.5 N.D. N.D. N.D. N.D.
nitrogen source L-Serine (N) -4.4 N.D. N.D. N.D. N.D.
carbon source L-Lactate (C) -4.3 N.D. N.D. N.D. N.D.
vitamin With vitamins t2 -4.3 N.D. N.D. N.D. N.D.
carbon source L-Fucose (C) -4.2 N.D. N.D. N.D. N.D.
carbon source L-Histidine (C) -4.2 N.D. N.D. N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -4.2 N.D. N.D. N.D. N.D.
carbon source Protocatechuic Acid (C) -4.2 N.D. N.D. N.D. N.D.
carbon source D-Xylose (C) -4.2 N.D. N.D. N.D. N.D.
carbon source m-Inositol (C) -4.2 N.D. N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -4.1 N.D. N.D. N.D. N.D.
nitrogen source Ammonium chloride (N) -4.1 N.D. N.D. N.D. N.D.
carbon source D-Gluconic Acid (C) -4.1 N.D. N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -4.0 N.D. N.D. N.D. N.D.
carbon source D,L-Lactate (C) -4.0 N.D. N.D. N.D. N.D.
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -3.9 N.D. N.D. N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -3.9 N.D. N.D. N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -3.9 N.D. N.D. N.D. N.D.
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