Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS33890 and BPHYT_RS33895 are separated by 139 nucleotidesBPHYT_RS33895 and BPHYT_RS33900 are separated by 338 nucleotidesBPHYT_RS33900 and BPHYT_RS33905 are separated by 153 nucleotidesBPHYT_RS33905 and BPHYT_RS33910 are separated by 87 nucleotides BPHYT_RS33890: BPHYT_RS33890 - fimbrial protein FimV, at 3,195,022 to 3,196,923 _RS33890 BPHYT_RS33895: BPHYT_RS33895 - aspartate-semialdehyde dehydrogenase, at 3,197,063 to 3,198,184 _RS33895 BPHYT_RS33900: BPHYT_RS33900 - 3-isopropylmalate dehydrogenase, at 3,198,523 to 3,199,590 _RS33900 BPHYT_RS33905: BPHYT_RS33905 - 3-isopropylmalate dehydratase small subunit, at 3,199,744 to 3,200,397 _RS33905 BPHYT_RS33910: BPHYT_RS33910 - entericidin, at 3,200,485 to 3,200,643 _RS33910
Group Condition BPHYT_RS33890 BPHYT_RS33895 BPHYT_RS33900 BPHYT_RS33905 BPHYT_RS33910
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days -1.4 N.D. -6.7 -3.6 N.D.
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 -0.3 N.D. -6.7 -3.7 N.D.
nitrogen source L-Phenylalanine (N) -0.1 N.D. -6.6 -3.8 N.D.
supernatant control Vogels_fungal_media 0.1X +0.1 N.D. -6.6 -3.8 N.D.
nitrogen source L-Glutamic (N) -0.3 N.D. -6.0 -3.8 N.D.
nitrogen source L-Asparagine (N) -0.4 N.D. -5.9 -3.8 N.D.
carbon source Putrescine (C) -0.1 N.D. -5.5 -4.3 N.D.
nutrient L-Histidine -0.1 N.D. -6.4 -3.1 N.D.
carbon source D-Lactate (C) -0.5 N.D. -6.0 -3.0 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.3 N.D. -5.1 -3.9 N.D.
nitrogen source L-Alanine (N) +0.3 N.D. -7.0 -2.7 N.D.
nitrogen source L-Glutamine (N) -0.5 N.D. -7.4 -1.4 N.D.
carbon source Disodium Glutarate (C) +0.1 N.D. -5.7 -3.7 N.D.
nitrogen source Putrescine (N) +0.1 N.D. -6.8 -2.5 N.D.
nitrogen source L-Lysine (N) +0.4 N.D. -5.7 -3.8 N.D.
carbon source L-Rhamnose (C) -0.1 N.D. -7.1 -1.9 N.D.
nitrogen source Carnitine Hydrochloride (N) +0.1 N.D. -5.3 -3.8 N.D.
carbon source L-Malic (C) -0.2 N.D. -6.0 -2.6 N.D.
carbon source L-Asparagine (C) +0.2 N.D. -5.9 -3.0 N.D.
carbon source D-Mannose (C) +0.1 N.D. -6.7 -1.9 N.D.
carbon source D-Glucose (C) -0.3 N.D. -5.8 -2.4 N.D.
carbon source D-Gluconic Acid (C) +0.2 N.D. -7.2 -1.5 N.D.
nitrogen source L-Proline (N) -0.3 N.D. -5.4 -2.8 N.D.
carbon source pyruvate (C) -0.4 N.D. -6.2 -1.6 N.D.
nitrogen source NAG (N) +0.1 N.D. -5.7 -2.4 N.D.
carbon source NAG (C) +0.4 N.D. -6.7 -1.7 N.D.
carbon source L-Alanine (C) +0.4 N.D. -6.0 -2.4 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X +0.1 N.D. -6.2 -1.8 N.D.
carbon source L-Histidine (C) +0.4 N.D. -6.0 -1.9 N.D.
carbon source D-Glucosamine Hydrochloride (C) +0.9 N.D. -5.1 -2.6 N.D.
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