Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS33865	BPHYT_RS33870	BPHYT_RS33875	BPHYT_RS33880	BPHYT_RS33885
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-6.8	-1.2	-7.7	-6.1	-1.6
nitrogen source	L-Phenylalanine (N)	-6.9	-0.9	-6.5	-6.9	-0.7
nitrogen source	L-Asparagine (N)	-6.1	-1.1	-6.9	-6.9	-0.5
carbon source	L-Phenylalanine (C)	-6.3	-0.8	-6.7	-6.5	-0.9
carbon source	D-Lactate (C)	-7.1	-0.7	-6.1	-6.5	-0.7
nitrogen source	L-Glutamine (N)	-6.0	-0.9	-6.7	-6.8	-0.7
nutrient	L-Histidine	-6.5	-1.5	-6.2	-6.4	-0.3
nitrogen source	Ammonium chloride (N)	-6.6	-1.3	-5.8	-6.7	-0.5
nitrogen source	D-Alanine (N)	-6.5	-0.9	-6.7	-5.7	-0.5
nitrogen source	L-Proline (N)	-6.5	-1.0	-5.7	-6.0	-1.1
nutrient	L-Histidine	-6.4	-1.5	-5.9	-6.1	-0.2
carbon source	pyruvate (C)	-6.1	-1.0	-6.3	-5.9	-0.7
nitrogen source	L-Alanine (N)	-6.8	-0.8	-5.2	-7.0	-0.2
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-5.9	-0.9	-6.8	-5.2	-1.1
carbon source	L-Glutamine (C)	-4.9	-0.8	-7.0	-6.6	-0.6
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-5.8	-1.1	-5.4	-6.2	-1.4
carbon source	D-Galactose (C)	-5.7	-1.1	-6.1	-5.8	-0.9
carbon source	D-Glucose (C)	-6.6	-1.3	-5.0	-6.1	-0.7
nitrogen source	Carnitine Hydrochloride (N)	-5.3	-0.7	-6.5	-6.1	-0.9
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X	-6.0	-0.5	-5.3	-6.8	-0.8
carbon source	L-Proline (C)	-4.5	-0.3	-7.1	-6.6	-0.7
nitrogen source	Putrescine (N)	-6.2	-0.6	-5.6	-6.2	-0.7
carbon source	L-Lactate (C)	-5.4	-0.6	-6.0	-7.0	-0.3
carbon source	succinate (C)	-6.7	-0.7	-6.3	-4.9	-0.5
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-6.0	-0.2	-6.1	-6.1	-0.6
nutrient	casaminos	-5.7	-1.2	-5.5	-6.2	-0.3
nutrient	Min media with glucose	-5.7	-1.1	-6.3	-5.7	-0.1
carbon source	Protocatechuic Acid (C)	-5.2	-1.1	-6.1	-5.6	-0.5
nutrient	L-Serine	-6.5	-1.2	-5.4	-5.3	+0.1
nutrient	L-Serine	-5.6	-0.9	-6.3	-5.6	+0.2