Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS33765	BPHYT_RS33770	BPHYT_RS33775	BPHYT_RS33780	BPHYT_RS33785
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	-3.9	-2.3	-0.5	-0.7	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-4.1	-0.1	-0.3	-0.6	-0.8
in planta	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1	-2.8	-1.6	-0.3	-0.5	+0.1
temperature	LB, 37C	-4.6	+0.0	+0.1	-0.4	-0.1
nitrogen source	L-Phenylalanine (N)	-4.8	+0.1	-0.2	+0.1	+0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-4.0	+0.1	-0.3	-0.2	-0.2
nitrogen source	L-Glutamic (N)	-3.4	-0.4	-0.1	-0.1	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-3.9	+0.4	+0.1	-0.1	-0.6
phage	24hr PHYTO3 MOI 10	-2.6	-0.2	-0.1	+0.4	-0.9
in planta	Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10	+0.3	-1.6	-1.4	-0.8	+0.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	-2.9	+0.1	-0.1	-0.3	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.6	+0.1	-0.0	-0.3	-0.3
carbon source	Phenylacetic 5 mM (C)	-2.4	-0.0	-0.1	+0.2	-0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-2.5	-0.0	+0.1	-0.2	-0.5
phage	P. phyto corn MOI 0.1	-2.7	-0.1	-0.1	-0.3	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-2.5	-0.1	+0.0	-0.2	-0.1
phage	24hr PHYTO11 MOI 0.1	-2.1	+0.0	+0.1	-0.2	-0.5
phage	36hr PHYTO8 MOI 10	-2.2	+0.1	-0.5	+0.0	+0.2
phage	36hr PHYTO8 MOI 0.1	-2.2	+0.3	-0.2	+0.0	-0.2
phage	36hr PHYTO6 MOI 10	-2.1	+0.3	-0.2	+0.0	-0.3
motility	inner cut, LB soft agar motility assay	-2.7	+0.4	+0.0	+0.2	-0.0
phage	24hr PHYTO2 MOI 1	-2.4	-0.2	+0.0	+0.2	+0.3
phage	36hr PHYTO2 MOI 1	-2.3	-0.0	-0.2	+0.2	+0.3
nophagecontrol	24hr Phyto Lib Only	-2.4	+0.4	-0.1	-0.0	+0.2
nophagecontrol	36hr Phyto Lib only	-2.2	+0.5	-0.1	+0.0	-0.3
motility	outer cut, LB soft agar motility assay	-2.7	-0.0	+0.0	+0.3	+1.1
phage	36hr PHYTO10 MOI 10	-2.0	+0.3	+0.1	+0.2	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+2.5	-0.5	-0.4	-0.7	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+1.8	-0.2	+0.0	-0.3	+0.5
phage	36hr PHYTO2 MOI 1	+2.7	+0.3	-0.1	+0.0	+0.5