Fitness for 5 genes in Burkholderia phytofirmans PsJN

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

500 ntBPHYT_RS32725 and BPHYT_RS32730 are separated by 242 nucleotidesBPHYT_RS32730 and BPHYT_RS32735 are separated by 18 nucleotidesBPHYT_RS32735 and BPHYT_RS32740 are separated by 109 nucleotidesBPHYT_RS32740 and BPHYT_RS32745 are separated by 19 nucleotides BPHYT_RS32725: BPHYT_RS32725 - cobalt transporter, at 2,921,732 to 2,921,953 _RS32725 BPHYT_RS32730: BPHYT_RS32730 - histidine phosphatase, at 2,922,196 to 2,922,792 _RS32730 BPHYT_RS32735: BPHYT_RS32735 - hypothetical protein, at 2,922,811 to 2,923,251 _RS32735 BPHYT_RS32740: BPHYT_RS32740 - hypothetical protein, at 2,923,361 to 2,924,377 _RS32740 BPHYT_RS32745: BPHYT_RS32745 - major facilitator transporter, at 2,924,397 to 2,925,755 _RS32745
Group Condition BPHYT_RS32725 BPHYT_RS32730 BPHYT_RS32735 BPHYT_RS32740 BPHYT_RS32745
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -0.7 -0.6 -0.2 +0.3
phage 24hr PHYTO3 MOI 10 -0.3 -1.7 +0.7 +0.2 -0.9
nitrogen source NAG (N) -0.5 -0.8 -0.4 +0.2 -0.5
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X -0.6 -0.7 -0.4 -0.1 -0.2
nophagecontrol 36hr Phyto Lib Only -0.4 -0.7 +0.1 -0.1 -0.6
nitrogen source L-Glutamic (N) +0.5 -1.9 +0.4 +0.0 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -0.8 +0.4 +0.2 -0.2
carbon source Phenylacetic 5 mM (C) +0.5 -0.7 -0.6 +0.1 +0.1
phage 36hr PHYTO1 MOI 10 -0.6 -0.1 +0.7 -0.0 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.4 -0.4 +0.6 +0.2 -0.4
nitrogen source Uridine (N) +0.5 -1.7 +0.3 +0.2 +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.3 +0.6 +0.4 -0.0 +0.1
phage 24hr PHYTO6 MOI 0.1 -0.6 +0.7 +0.6 -0.4 -0.5
phage 24hr PHYTO2 MOI 1 -0.5 +0.5 +1.0 -0.3 -0.6
phage 36hr PHYTO6 MOI 0.1 +0.2 -0.4 +0.9 +0.1 -0.6
motility outer cut, LB soft agar motility assay -0.5 -0.4 +1.2 -0.1 +0.0
vitamin With vitamins t1 -0.3 +1.0 +0.2 -0.2 -0.2
phage 36hr PHYTO6 MOI 1 -0.1 +0.8 +0.6 -0.4 -0.5
phage 24hr PHYTO6 MOI 10 -0.0 +0.6 +0.3 +0.4 -0.7
nophagecontrol 24hr Phyto Lib Only +0.4 -0.7 +1.0 -0.1 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 +0.6 +0.7 -0.4 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.9 +0.5 +0.1 -0.4 -0.4
phage 24hr PHYTO1 MOI 10 +0.8 -0.6 +0.7 -0.2 -0.0
phage 24hr PHYTO3 MOI 0.1 -0.5 +0.4 +0.9 -0.1 +0.1
phage 24hr PHYTO9 MOI 10 -0.2 +0.8 +0.7 -0.3 -0.1
phage 36hr PHYTO3 MOI 1 -0.3 +0.7 +1.0 -0.2 -0.1
phage 36hr PHYTO6 MOI 10 -0.4 +0.8 +0.7 +0.1 -0.1
phage 24hr PHYTO3 MOI 1 -0.3 +1.1 +0.6 +0.1 +0.1
phage 36hr PHYTO3 MOI 1 +0.4 +0.8 +0.7 +0.1 +0.2
phage 36hr PHYTO11 MOI 1 +1.1 +0.7 +0.8 -0.2 +0.2
remove
BPHYT_RS32725
plot		 remove
BPHYT_RS32730
plot		 remove
BPHYT_RS32735		 remove
BPHYT_RS32740
plot		 remove
BPHYT_RS32745
plot