Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS32290 and BPHYT_RS32295 are separated by 86 nucleotidesBPHYT_RS32295 and BPHYT_RS32300 are separated by 6 nucleotidesBPHYT_RS32300 and BPHYT_RS32305 are separated by 202 nucleotidesBPHYT_RS32305 and BPHYT_RS32310 are separated by 154 nucleotides BPHYT_RS32290: BPHYT_RS32290 - hypothetical protein, at 2,814,521 to 2,815,210 _RS32290 BPHYT_RS32295: BPHYT_RS32295 - ATP-binding protein, at 2,815,297 to 2,816,085 _RS32295 BPHYT_RS32300: BPHYT_RS32300 - integrase, at 2,816,092 to 2,817,609 _RS32300 BPHYT_RS32305: BPHYT_RS32305 - hypothetical protein, at 2,817,812 to 2,818,234 _RS32305 BPHYT_RS32310: BPHYT_RS32310 - porin, at 2,818,389 to 2,819,576 _RS32310
Group Condition BPHYT_RS32290 BPHYT_RS32295 BPHYT_RS32300 BPHYT_RS32305 BPHYT_RS32310
nophagecontrol 36hr Phyto Lib only -4.8 N.D. N.D. N.D. -0.1
phage 24hr PHYTO1 MOI 1 -1.3 N.D. N.D. N.D. -1.6
carbon source 2-Deoxy-D-ribonic lithium salt (C) -2.4 N.D. N.D. N.D. -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.9 N.D. N.D. N.D. -0.3
phage 24hr PHYTO3 MOI 1 -1.4 N.D. N.D. N.D. -0.6
phage 24hr PHYTO11 MOI 1 -0.9 N.D. N.D. N.D. -0.8
phage 24hr PHYTO10 MOI 10 -0.2 N.D. N.D. N.D. -1.4
phage 36hr PHYTO10 MOI 10 -1.0 N.D. N.D. N.D. -0.5
phage 24hr PHYTO1 MOI 10 -1.0 N.D. N.D. N.D. -0.6
phage P. phyto corn MOI 1 -1.2 N.D. N.D. N.D. -0.3
phage 36hr PHYTO6 MOI 0.1 -1.3 N.D. N.D. N.D. -0.2
phage 36hr PHYTO3 MOI 1 -0.6 N.D. N.D. N.D. -0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.9 N.D. N.D. N.D. -0.5
phage 24hr PHYTO11 MOI 0.1 -1.3 N.D. N.D. N.D. -0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.4 N.D. N.D. N.D. +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 N.D. N.D. N.D. +0.4
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.6 N.D. N.D. N.D. -0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 N.D. N.D. N.D. -0.8
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -0.8 N.D. N.D. N.D. +0.7
phage 24hr PHYTO2 MOI 0.1 +0.7 N.D. N.D. N.D. -0.7
phage 36hr PHYTO9 MOI 1 +0.8 N.D. N.D. N.D. -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.2 N.D. N.D. N.D. -0.9
nophagecontrol 24hr Phyto Lib Only +0.9 N.D. N.D. N.D. -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.1 N.D. N.D. N.D. -0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.2 N.D. N.D. N.D. -0.8
phage 24hr PHYTO4 MOI 10 +1.1 N.D. N.D. N.D. -0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 N.D. N.D. N.D. -0.5
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.1 N.D. N.D. N.D. +1.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.3 N.D. N.D. N.D. +0.4
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +1.3 N.D. N.D. N.D. +0.8
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