Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS31795 and BPHYT_RS31800 are separated by 92 nucleotidesBPHYT_RS31800 and BPHYT_RS31805 are separated by 48 nucleotidesBPHYT_RS31805 and BPHYT_RS31810 are separated by 358 nucleotidesBPHYT_RS31810 and BPHYT_RS31815 are separated by 768 nucleotides BPHYT_RS31795: BPHYT_RS31795 - aldo/keto reductase, at 2,691,818 to 2,692,837 _RS31795 BPHYT_RS31800: BPHYT_RS31800 - NmrA family transcriptional regulator, at 2,692,930 to 2,693,796 _RS31800 BPHYT_RS31805: BPHYT_RS31805 - beta-lactamase, at 2,693,845 to 2,695,158 _RS31805 BPHYT_RS31810: BPHYT_RS31810 - LysR family transcriptional regulator, at 2,695,517 to 2,696,431 _RS31810 BPHYT_RS31815: BPHYT_RS31815 - hypothetical protein, at 2,697,200 to 2,697,400 _RS31815
Group Condition BPHYT_RS31795 BPHYT_RS31800 BPHYT_RS31805 BPHYT_RS31810 BPHYT_RS31815
carbon source Xylitol (C) +0.6 N.D. -0.8 N.D. -2.5
carbon source L-Glutamine (C) -0.2 N.D. +0.0 N.D. -2.5
phage 36hr PHYTO4 MOI 1 -0.4 N.D. -1.0 N.D. -1.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.4 N.D. -0.5 N.D. -1.7
carbon source adipate (C) -0.0 N.D. -0.3 N.D. -2.2
carbon source Azelaic (C) -0.2 N.D. +0.1 N.D. -2.3
phage 24hr PHYTO11 MOI 1 -0.3 N.D. -1.1 N.D. -0.8
carbon source 2-Deoxy-D-Ribose (C) -0.0 N.D. -0.2 N.D. -2.0
carbon source Suberic (C) -0.4 N.D. +0.1 N.D. -1.9
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 N.D. -0.4 N.D. -1.4
carbon source Trisodium citrate (C) +0.2 N.D. -0.4 N.D. -1.9
phage 36hr PHYTO4 MOI 1 +0.2 N.D. -1.4 N.D. -0.8
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 N.D. -0.1 N.D. -1.1
phage 24hr PHYTO10 MOI 10 -0.6 N.D. -0.8 N.D. -0.5
carbon source Phenylacetic 5 mM (C) -0.6 N.D. -0.4 N.D. -0.9
phage 36hr PHYTO1 MOI 1 -0.5 N.D. -1.3 N.D. -0.1
phage 36hr PHYTO8 MOI 10 -0.1 N.D. -1.1 N.D. -0.6
carbon source Sebacic (C) -0.5 N.D. +0.2 N.D. -1.5
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.1 N.D. -0.2 N.D. -1.6
nophagecontrol 36hr Phyto Lib Only +0.1 N.D. -1.1 N.D. -0.8
phage 36hr PHYTO2 MOI 1 +0.3 N.D. -0.9 N.D. -1.2
phage 24hr PHYTO MOI 0.1 +0.1 N.D. -0.6 N.D. -1.3
carbon source Gly-Glu (C) +0.1 N.D. +0.0 N.D. -1.9
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 N.D. -0.6 N.D. -1.4
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.2 N.D. -0.5 N.D. -1.4
phage 36hr PHYTO3 MOI 0.1 +0.3 N.D. -1.0 N.D. -0.9
carbon source D-Xylose (C) +0.1 N.D. -0.5 N.D. -1.2
in planta Plant=switchgrass; PlantTreatment=high_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=3weeks; NumberPlantsPooled=10 +0.2 N.D. +0.7 N.D. -0.9
carbon source Disodium Glutarate (C) -0.4 N.D. -0.6 N.D. +8.0
carbon source Disodium Glutarate (C) -0.2 N.D. +0.1 N.D. +8.6
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