Fitness for 5 genes in Burkholderia phytofirmans PsJN

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

500 ntBPHYT_RS31350 and BPHYT_RS31355 are separated by 286 nucleotidesBPHYT_RS31355 and BPHYT_RS31360 are separated by 54 nucleotidesBPHYT_RS31360 and BPHYT_RS31365 are separated by 333 nucleotidesBPHYT_RS31365 and BPHYT_RS31370 are separated by 269 nucleotides BPHYT_RS31350: BPHYT_RS31350 - LysR family transcriptional regulator, at 2,588,278 to 2,589,192 _RS31350 BPHYT_RS31355: BPHYT_RS31355 - hypothetical protein, at 2,589,479 to 2,589,787 _RS31355 BPHYT_RS31360: BPHYT_RS31360 - ATP-dependent DNA helicase RecQ, at 2,589,842 to 2,591,608 _RS31360 BPHYT_RS31365: BPHYT_RS31365 - hypothetical protein, at 2,591,942 to 2,592,703 _RS31365 BPHYT_RS31370: BPHYT_RS31370 - hypothetical protein, at 2,592,973 to 2,593,179 _RS31370
Group Condition BPHYT_RS31350 BPHYT_RS31355 BPHYT_RS31360 BPHYT_RS31365 BPHYT_RS31370
phage 24hr PHYTO11 MOI 1 -0.5 N.D. -1.0 N.D. N.D.
phage 36hr PHYTO4 MOI 1 -0.9 N.D. -0.6 N.D. N.D.
phage 24hr PHYTO2 MOI 1 -0.3 N.D. -0.8 N.D. N.D.
phage 36hr PHYTO MOI 0.1 -0.3 N.D. -0.7 N.D. N.D.
phage 36hr PHYTO8 MOI 0.1 -0.3 N.D. -0.8 N.D. N.D.
phage 36hr PHYTO2 MOI 1 -0.4 N.D. -0.6 N.D. N.D.
phage 24hr PHYTO8 MOI 1 -0.2 N.D. -0.8 N.D. N.D.
carbon source Malonic (C) -1.5 N.D. +0.5 N.D. N.D.
phage 24hr PHYTO6 MOI 0.1 -0.2 N.D. -0.8 N.D. N.D.
phage 36hr PHYTO6 MOI 1 -0.3 N.D. -0.6 N.D. N.D.
phage 36hr PHYTO10 MOI 10 -0.4 N.D. -0.5 N.D. N.D.
lb_dap plate control LB_DAP agar plate, outgrowth in LB -0.5 N.D. -0.4 N.D. N.D.
nophagecontrol 24hr Phyto Lib only -0.4 N.D. -0.5 N.D. N.D.
phage P. phyto PHYTO2 MOI 1 -0.3 N.D. -0.6 N.D. N.D.
nophagecontrol 24hr Phyto Lib Only -0.2 N.D. -0.6 N.D. N.D.
phage 36hr PHYTO1 MOI 10 -0.4 N.D. -0.5 N.D. N.D.
phage 36hr PHYTO11 MOI 1 -0.3 N.D. -0.5 N.D. N.D.
phage P. phyto PHYTO2 MOI 1 -0.4 N.D. -0.4 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.3 N.D. -0.5 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days -0.3 N.D. -0.5 N.D. N.D.
phage 36hr PHYTO1 MOI 1 -0.2 N.D. -0.6 N.D. N.D.
carbon source Malonic (C) -0.9 N.D. +0.2 N.D. N.D.
phage 24hr PHYTO2 MOI 0.1 +0.2 N.D. -0.5 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.3 N.D. -0.5 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 N.D. -0.4 N.D. N.D.
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.5 N.D. -0.4 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.5 N.D. -0.3 N.D. N.D.
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.5 N.D. -0.3 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 N.D. -0.2 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 N.D. +0.4 N.D. N.D.
remove
BPHYT_RS31350
plot		 remove
BPHYT_RS31355
plot		 remove
BPHYT_RS31360		 remove
BPHYT_RS31365
plot		 remove
BPHYT_RS31370
plot