Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS31135	BPHYT_RS31140	BPHYT_RS31145	BPHYT_RS31150	BPHYT_RS31155
phage	24hr PHYTO2 MOI 1	-0.4	-0.6	-0.4	-1.0	-0.1
phage	24hr PHYTO10 MOI 1	-0.6	-0.5	-0.2	-1.3	-0.0
phage	36hr PHYTO8 MOI 0.1	-0.5	-0.5	+0.0	-1.3	-0.1
carbon source	Suberic (C)	-0.1	-0.6	-0.2	-0.9	-0.6
phage	P. phyto PHYTO2 MOI 0.1	-0.0	-0.2	+0.1	-2.1	-0.2
phage	36hr PHYTO2 MOI 1	-0.9	-0.1	+0.0	-1.1	-0.3
motility	inner cut, LB soft agar motility assay	-0.1	-0.3	-0.5	-1.2	-0.2
phage	24hr PHYTO11 MOI 0.1	-0.6	-0.1	-0.2	-0.7	-0.6
phage	36hr PHYTO3 MOI 0.1	-0.2	-0.4	-0.6	-0.7	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.4	-0.6	-0.1	-0.6	-0.4
phage	36hr PHYTO11 MOI 1	-1.0	-0.3	-0.1	-0.5	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.1	-0.8	+0.1	-0.9	-0.5
phage	P. phyto PHYTO2 MOI 1	+0.3	-0.1	-0.3	-1.4	-0.5
nitrogen source	L-Isoleucine (N)	-0.2	-0.7	-0.2	-1.1	+0.1
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB	-0.5	-0.1	-0.8	-0.6	+0.1
phage	P. phyto PHYTO2 MOI 1	-0.3	+0.1	-0.4	-1.3	-0.0
phage	24hr PHYTO8 MOI 1	-0.6	-0.3	-0.1	+0.3	-1.1
phage	24hr PHYTO1 MOI 1	-0.3	-0.5	-0.1	-1.0	+0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.4	-0.2	-0.5	-1.0	-0.3
phage	24hr PHYTO MOI 0.1	-0.6	-0.5	+0.1	-0.6	+0.3
in planta	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1	-0.1	-0.3	+0.4	-0.6	-0.7
phage	24hr PHYTO6 MOI 1	-0.2	-0.3	-0.9	-0.3	+0.4
phage	24hr PHYTO3 MOI 10	-1.2	+0.4	-0.5	-0.4	+0.4
phage	24hr PHYTO10 MOI 10	-0.5	-0.2	-0.1	-0.8	+0.4
motility	outer cut, LB soft agar motility assay	+0.4	+0.5	-0.5	-0.9	-0.8
nophagecontrol	36hr Phyto Lib only	-0.3	-0.5	+0.1	-0.8	+0.4
phage	36hr PHYTO9 MOI 0.1	-0.3	-0.3	+0.3	-1.0	+0.3
carbon source	Phenylacetic 5 mM (C)	+0.5	-0.3	+0.1	-0.3	-1.1
phage	24hr PHYTO4 MOI 0.1	-0.5	-0.2	-0.3	-0.3	+0.9
phage	36hr PHYTO1 MOI 10	-0.4	-0.3	-0.4	+0.9	+0.4