Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS31110 and BPHYT_RS31115 are separated by 65 nucleotidesBPHYT_RS31115 and BPHYT_RS31120 are separated by 120 nucleotidesBPHYT_RS31120 and BPHYT_RS31125 are separated by 71 nucleotidesBPHYT_RS31125 and BPHYT_RS31130 are separated by 100 nucleotides BPHYT_RS31110: BPHYT_RS31110 - hypothetical protein, at 2,535,478 to 2,535,786 _RS31110 BPHYT_RS31115: BPHYT_RS31115 - glucosidase, at 2,535,852 to 2,538,593 _RS31115 BPHYT_RS31120: BPHYT_RS31120 - pseudouridine-5'-phosphate glycosidase, at 2,538,714 to 2,539,667 _RS31120 BPHYT_RS31125: BPHYT_RS31125 - hypothetical protein, at 2,539,739 to 2,540,188 _RS31125 BPHYT_RS31130: BPHYT_RS31130 - hypothetical protein, at 2,540,289 to 2,540,492 _RS31130
Group Condition BPHYT_RS31110 BPHYT_RS31115 BPHYT_RS31120 BPHYT_RS31125 BPHYT_RS31130
phage 36hr PHYTO1 MOI 10 -0.6 +0.3 +0.3 -3.7 -0.8
phage 36hr PHYTO6 MOI 1 -0.9 -0.1 -0.3 -1.3 -0.6
phage P. phyto PHYTO2 MOI 1 +0.0 -0.0 -0.2 -0.1 -2.8
phage PHYTO3 MOI 0.1 -1.2 +0.2 +0.1 -0.9 -1.2
no phage control No phage control -1.0 -0.0 -0.2 -0.8 -0.5
phage P. phyto PHYTO2 MOI 0.1 -1.3 -0.0 -0.3 +0.3 -1.1
phage 36hr PHYTO8 MOI 10 -0.5 -0.2 +0.1 -2.0 +0.3
phage 36hr PHYTO11 MOI 0.1 +0.0 +0.2 +0.1 -2.6 +0.1
carbon source Phenylacetic 5 mM (C) -0.5 +0.0 -0.1 -1.7 +0.4
phage P. phyto corn MOI 1 -0.8 +0.2 -0.4 -1.0 +0.2
phage 24hr PHYTO4 MOI 0.1 -1.3 +0.0 +0.6 -1.0 +0.0
phage 24hr PHYTO10 MOI 10 -1.3 +0.3 +0.0 -0.8 +0.2
phage 36hr PHYTO7 MOI 1 +0.1 +0.3 -0.2 -2.6 +0.7
phage 24hr PHYTO7 MOI 1 -1.2 -0.0 +0.2 +0.6 -1.1
phage 36hr PHYTO1 MOI 1 -0.1 +0.2 -0.4 -1.7 +0.5
nophagecontrol 36hr Phyto Lib Only -0.4 +0.1 +0.1 -1.6 +0.6
phage 36hr PHYTO2 MOI 1 +0.5 +0.2 +0.3 -1.6 -0.3
phage 24hr PHYTO1 MOI 10 -0.3 +0.4 +0.3 -1.7 +0.4
phage 24hr PHYTO9 MOI 10 -1.4 -0.1 +0.1 +0.4 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.6 +0.2 -0.6 -1.3 +0.9
carbon source Sebacic (C) +0.3 +0.1 +0.8 -1.4 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -0.0 +0.5 -0.4 +0.9
nophagecontrol 36hr Phyto Lib only -0.6 +0.2 -0.1 -0.8 +1.4
nitrogen source L-Lysine (N) -1.4 -0.2 -0.7 +1.7 +0.7
phage 36hr PHYTO7 MOI 0.1 -0.9 +0.4 -0.1 +0.6 +0.7
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -0.0 +1.1 +0.7 -0.6
phage 24hr PHYTO3 MOI 10 -0.9 -0.1 +0.5 +1.3 +0.3
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +1.5 +0.4 -0.4 +0.1 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.1 +1.3 +0.2 -0.8
phage 36hr PHYTO4 MOI 1 +1.5 +0.3 +0.3 -0.5 +0.3
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