Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS31005 and BPHYT_RS31010 are separated by 219 nucleotidesBPHYT_RS31010 and BPHYT_RS31015 overlap by 4 nucleotidesBPHYT_RS31015 and BPHYT_RS31020 overlap by 17 nucleotidesBPHYT_RS31020 and BPHYT_RS31025 overlap by 4 nucleotides BPHYT_RS31005: BPHYT_RS31005 - hypothetical protein, at 2,511,073 to 2,512,074 _RS31005 BPHYT_RS31010: BPHYT_RS31010 - arabinose 5-phosphate isomerase, at 2,512,294 to 2,513,229 _RS31010 BPHYT_RS31015: BPHYT_RS31015 - 3-deoxy-manno-octulosonate cytidylyltransferase 2, at 2,513,226 to 2,514,017 _RS31015 BPHYT_RS31020: BPHYT_RS31020 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, at 2,514,001 to 2,514,555 _RS31020 BPHYT_RS31025: BPHYT_RS31025 - 2-dehydro-3-deoxyphosphooctonate aldolase, at 2,514,552 to 2,515,412 _RS31025
Group Condition BPHYT_RS31005 BPHYT_RS31010 BPHYT_RS31015 BPHYT_RS31020 BPHYT_RS31025
phage P. phyto PHYTO2 MOI 1 N.D. N.D. -0.7 -2.1 N.D.
phage 24hr PHYTO3 MOI 10 N.D. N.D. -1.6 -0.9 N.D.
phage 36hr PHYTO6 MOI 10 N.D. N.D. -1.2 -1.3 N.D.
phage P. phyto PHYTO2 MOI 1 N.D. N.D. -0.3 -2.1 N.D.
phage 24hr PHYTO6 MOI 10 N.D. N.D. -0.9 -1.4 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. N.D. -0.1 -2.0 N.D.
nophagecontrol 24hr Phyto Lib Only N.D. N.D. -0.7 -1.3 N.D.
phage 24hr PHYTO3 MOI 1 N.D. N.D. -0.2 -1.6 N.D.
phage 24hr PHYTO1 MOI 10 N.D. N.D. -0.3 -1.5 N.D.
phage 36hr PHYTO1 MOI 10 N.D. N.D. -0.8 -0.9 N.D.
phage 24hr PHYTO4 MOI 10 N.D. N.D. -0.0 -1.6 N.D.
phage 24hr PHYTO2 MOI 0.1 N.D. N.D. -0.8 -0.7 N.D.
phage 36hr PHYTO8 MOI 10 N.D. N.D. -1.4 +0.3 N.D.
phage 24hr PHYTO3 MOI 10 N.D. N.D. +0.7 -1.5 N.D.
supernatant control Vogels_fungal_media; pH 5.5 N.D. N.D. -0.4 +1.3 N.D.
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.3 +1.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.6 +0.9 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.6 +1.0 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.8 +0.8 N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days N.D. N.D. +0.6 +0.9 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X N.D. N.D. +0.6 +1.0 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.6 +1.0 N.D.
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.7 +0.9 N.D.
carbon source D-Ribose (C) N.D. N.D. +0.6 +1.0 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days N.D. N.D. +0.5 +1.2 N.D.
carbon source Malonic (C) N.D. N.D. +0.7 +1.1 N.D.
nutrient L-Histidine N.D. N.D. +0.3 +1.5 N.D.
stress Bacitracin 0.25 mg/ml N.D. N.D. +0.7 +1.2 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. N.D. +0.9 +1.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.8 +1.3 N.D.
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