Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

Or view all 321 experiments or choose conditions or try the comparative fitness browser

Group	Condition	BPHYT_RS30555	BPHYT_RS30560	BPHYT_RS30565	BPHYT_RS30570	BPHYT_RS30575
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	-0.7	-0.3	-1.2	N.D.	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-0.3	-0.2	-1.2	N.D.	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.1	-0.3	-0.2	N.D.	N.D.
carbon source	succinate (C)	-1.3	-0.6	+0.3	N.D.	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.9	-0.1	-0.6	N.D.	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.8	+0.0	-0.7	N.D.	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.9	-0.3	-0.2	N.D.	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days	-0.1	-0.1	-1.2	N.D.	N.D.
carbon source	Suberic (C)	-0.8	-0.8	+0.2	N.D.	N.D.
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.5	+0.1	-0.9	N.D.	N.D.
carbon source	Suberic (C)	-0.6	-0.7	+0.2	N.D.	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.0	-0.2	+0.4	N.D.	N.D.
carbon source	m-Inositol (C)	-0.5	-0.5	+0.4	N.D.	N.D.
carbon source	Phenylacetic 5 mM (C)	-0.9	+0.5	-0.1	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	+0.3	+0.1	-0.9	N.D.	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	-0.7	+0.6	-0.2	N.D.	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6	-0.5	-0.4	N.D.	N.D.
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.4	+0.6	-0.3	N.D.	N.D.
phage	P. phyto corn MOI 0.1	+0.2	-0.6	+0.5	N.D.	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.6	+0.9	-0.1	N.D.	N.D.
phage	36hr PHYTO4 MOI 1	+0.3	-0.3	+0.7	N.D.	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.5	-0.4	+0.6	N.D.	N.D.
phage	24hr PHYTO4 MOI 10	+0.6	+0.6	-0.2	N.D.	N.D.
phage	24hr PHYTO2 MOI 0.1	+0.4	+0.4	+0.5	N.D.	N.D.
nophagecontrol	36hr Phyto Lib Only	+0.4	+0.5	+0.5	N.D.	N.D.
phage	P. phyto PHYTO2 MOI 1	+0.5	+0.6	+0.5	N.D.	N.D.
temperature	LB 37C	-0.1	-0.3	+2.0	N.D.	N.D.
phage	24hr PHYTO3 MOI 10	+0.6	+0.1	+1.1	N.D.	N.D.
phage	P. phyto PHYTO2 MOI 0.1	+0.6	+0.3	+0.9	N.D.	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.9	+0.2	+0.8	N.D.	N.D.