Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS30520 and BPHYT_RS30525 are separated by 234 nucleotidesBPHYT_RS30525 and BPHYT_RS30530 are separated by 272 nucleotidesBPHYT_RS30530 and BPHYT_RS30535 are separated by 113 nucleotidesBPHYT_RS30535 and BPHYT_RS30540 are separated by 393 nucleotides BPHYT_RS30520: BPHYT_RS30520 - ABC transporter substrate-binding protein, at 2,407,320 to 2,408,366 _RS30520 BPHYT_RS30525: BPHYT_RS30525 - nitrate ABC transporter substrate-binding protein, at 2,408,601 to 2,409,596 _RS30525 BPHYT_RS30530: BPHYT_RS30530 - ABC transporter substrate-binding protein, at 2,409,869 to 2,410,882 _RS30530 BPHYT_RS30535: BPHYT_RS30535 - hypothetical protein, at 2,410,996 to 2,411,646 _RS30535 BPHYT_RS30540: BPHYT_RS30540 - hypothetical protein, at 2,412,040 to 2,412,285 _RS30540
Group Condition BPHYT_RS30520 BPHYT_RS30525 BPHYT_RS30530 BPHYT_RS30535 BPHYT_RS30540
phage 36hr PHYTO4 MOI 1 -0.4 N.D. -1.1 N.D. N.D.
phage 36hr PHYTO2 MOI 0.1 -0.3 N.D. -0.8 N.D. N.D.
phage 36hr PHYTO11 MOI 1 -0.3 N.D. -0.8 N.D. N.D.
phage 24hr PHYTO3 MOI 0.1 +0.2 N.D. -1.1 N.D. N.D.
phage 36hr PHYTO6 MOI 0.1 -0.1 N.D. -0.8 N.D. N.D.
phage 24hr PHYTO6 MOI 1 -0.0 N.D. -0.9 N.D. N.D.
nophagecontrol 36hr Phyto Lib Only -0.1 N.D. -0.8 N.D. N.D.
phage 36hr PHYTO3 MOI 1 +0.2 N.D. -1.0 N.D. N.D.
phage 24hr PHYTO6 MOI 10 -0.5 N.D. -0.3 N.D. N.D.
phage 36hr PHYTO3 MOI 0.1 -0.0 N.D. -0.8 N.D. N.D.
phage 36hr PHYTO4 MOI 1 +0.4 N.D. -1.1 N.D. N.D.
nophagecontrol 24hr Phyto Lib only +0.4 N.D. -1.1 N.D. N.D.
phage 24hr PHYTO11 MOI 0.1 +0.1 N.D. -0.8 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.1 N.D. -0.7 N.D. N.D.
phage P. phyto corn MOI 1 +0.3 N.D. -0.9 N.D. N.D.
phage 36hr PHYTO10 MOI 10 +0.2 N.D. -0.8 N.D. N.D.
phage 24hr PHYTO6 MOI 0.1 +0.3 N.D. -0.9 N.D. N.D.
phage 36hr PHYTO3 MOI 1 +0.4 N.D. -0.4 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 N.D. -0.4 N.D. N.D.
stress Paraquat dichloride 0.032 mg/ml -0.4 N.D. +0.6 N.D. N.D.
phage 24hr PHYTO9 MOI 0.1 +0.6 N.D. -0.4 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.8 N.D. -0.5 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.8 N.D. -0.1 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.3 N.D. +0.6 N.D. N.D.
carbon source D-Glucose 20 mM (C) +0.3 N.D. +0.6 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 N.D. +0.4 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 N.D. +0.5 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 N.D. +0.8 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.8 N.D. +0.5 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.5 N.D. +0.1 N.D. N.D.
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