Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS30370 and BPHYT_RS30375 are separated by 52 nucleotidesBPHYT_RS30375 and BPHYT_RS30380 overlap by 11 nucleotidesBPHYT_RS30380 and BPHYT_RS30385 are separated by 48 nucleotidesBPHYT_RS30385 and BPHYT_RS30390 are separated by 41 nucleotides BPHYT_RS30370: BPHYT_RS30370 - thioredoxin reductase, at 2,368,836 to 2,370,563 _RS30370 BPHYT_RS30375: BPHYT_RS30375 - hypothetical protein, at 2,370,616 to 2,372,166 _RS30375 BPHYT_RS30380: BPHYT_RS30380 - glyoxalase, at 2,372,156 to 2,373,106 _RS30380 BPHYT_RS30385: BPHYT_RS30385 - hypothetical protein, at 2,373,155 to 2,373,406 _RS30385 BPHYT_RS30390: BPHYT_RS30390 - phosphohydrolase, at 2,373,448 to 2,374,089 _RS30390
Group Condition BPHYT_RS30370 BPHYT_RS30375 BPHYT_RS30380 BPHYT_RS30385 BPHYT_RS30390
phage 24hr PHYTO1 MOI 10 N.D. -1.1 -0.6 N.D. N.D.
phage 24hr PHYTO10 MOI 10 N.D. -0.9 -0.6 N.D. N.D.
phage 24hr PHYTO10 MOI 10 N.D. -1.0 -0.2 N.D. N.D.
phage 36hr PHYTO4 MOI 1 N.D. -0.8 -0.4 N.D. N.D.
phage 24hr PHYTO3 MOI 10 N.D. -1.1 -0.1 N.D. N.D.
phage 24hr PHYTO3 MOI 1 N.D. -0.7 -0.4 N.D. N.D.
phage 24hr PHYTO MOI 0.1 N.D. -1.1 -0.0 N.D. N.D.
nitrogen source L-Phenylalanine (N) N.D. -0.7 -0.4 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. -1.1 -0.1 N.D. N.D.
phage 36hr PHYTO6 MOI 10 N.D. -0.9 -0.2 N.D. N.D.
phage 24hr PHYTO11 MOI 1 N.D. -0.7 -0.4 N.D. N.D.
phage 36hr PHYTO9 MOI 1 N.D. -0.9 -0.2 N.D. N.D.
phage 24hr PHYTO6 MOI 1 N.D. -1.2 +0.1 N.D. N.D.
phage 24hr PHYTO2 MOI 0.1 N.D. -0.5 -0.6 N.D. N.D.
phage 36hr PHYTO1 MOI 1 N.D. -1.0 -0.1 N.D. N.D.
in planta Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days N.D. -0.4 -0.6 N.D. N.D.
phage 36hr PHYTO7 MOI 0.1 N.D. -0.6 -0.4 N.D. N.D.
phage 24hr PHYTO1 MOI 1 N.D. -1.0 -0.0 N.D. N.D.
nophagecontrol 36hr Phyto Lib only N.D. -0.8 -0.1 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.7 -0.2 N.D. N.D.
phage 36hr PHYTO1 MOI 1 N.D. -0.9 +0.0 N.D. N.D.
phage 36hr PHYTO6 MOI 1 N.D. -0.3 -0.6 N.D. N.D.
carbon source Azelaic (C) N.D. -0.6 -0.3 N.D. N.D.
phage 24hr PHYTO4 MOI 10 N.D. -1.0 +0.1 N.D. N.D.
r2a control R2A control N.D. -0.7 +0.3 N.D. N.D.
carbon source Tween 20 (C) N.D. +0.9 -0.4 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. +0.8 -0.2 N.D. N.D.
carbon source Malonic (C) N.D. +1.1 -0.3 N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB N.D. +0.7 +0.2 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.2 +1.2 N.D. N.D.
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