Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS29925 and BPHYT_RS29930 are separated by 355 nucleotidesBPHYT_RS29930 and BPHYT_RS29935 are separated by 10 nucleotidesBPHYT_RS29935 and BPHYT_RS29940 are separated by 110 nucleotidesBPHYT_RS29940 and BPHYT_RS29945 are separated by 429 nucleotides BPHYT_RS29925: BPHYT_RS29925 - shikimate transporter, at 2,265,538 to 2,266,857 _RS29925 BPHYT_RS29930: BPHYT_RS29930 - MFS transporter, at 2,267,213 to 2,268,616 _RS29930 BPHYT_RS29935: BPHYT_RS29935 - oxalate:formate antiporter, at 2,268,627 to 2,268,752 _RS29935 BPHYT_RS29940: BPHYT_RS29940 - hemagglutinin, at 2,268,863 to 2,271,757 _RS29940 BPHYT_RS29945: BPHYT_RS29945 - histidine kinase, at 2,272,187 to 2,273,407 _RS29945
Group Condition BPHYT_RS29925 BPHYT_RS29930 BPHYT_RS29935 BPHYT_RS29940 BPHYT_RS29945
phage 24hr PHYTO3 MOI 0.1 -0.4 -0.1 +0.3 -0.2 -2.9
phage 24hr PHYTO2 MOI 1 -0.2 -0.4 -0.3 -0.4 -1.1
nitrogen source L-Phenylalanine (N) -0.0 -0.2 -0.1 -0.4 -1.6
phage P. phyto corn MOI 1 -0.1 -0.1 +0.1 -0.0 -2.1
phage 36hr PHYTO4 MOI 1 +0.0 -0.3 -0.1 +0.0 -1.8
phage PHYTO3 MOI 0.1 -0.0 -0.0 +0.0 -0.2 -1.9
carbon source Disodium Glutarate (C) -0.1 -0.0 -0.3 -0.0 -1.6
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent -0.0 +0.0 -0.1 +0.0 -1.9
phage 36hr PHYTO11 MOI 0.1 +0.2 -0.2 +0.1 -0.2 -2.0
phage 24hr PHYTO2 MOI 0.1 -0.1 -0.3 -0.0 -0.3 -1.3
phage 36hr PHYTO6 MOI 10 -0.2 -0.1 +0.2 -0.2 -1.8
phage 36hr PHYTO8 MOI 0.1 -0.1 -0.1 -0.1 +0.1 -1.7
phage P. phyto corn MOI 0.1 -0.2 -0.0 +0.4 +0.1 -2.0
phage 36hr PHYTO10 MOI 10 -0.2 -0.1 +0.2 -0.1 -1.7
carbon source D-Glucose (C) +0.0 +0.1 +0.1 -0.0 -1.7
phage 24hr PHYTO4 MOI 0.1 +0.1 -0.1 +0.3 -0.1 -1.9
nophagecontrol 36hr Phyto Lib Only +0.1 -0.0 +0.1 -0.4 -1.3
carbon source Sebacic (C) -0.1 +0.3 -0.0 +0.2 -1.9
carbon source Protocatechuic Acid (C) -0.3 +0.1 +0.1 +0.0 -1.4
phage 36hr PHYTO6 MOI 0.1 -0.0 -0.3 +0.3 +0.0 -1.3
phage 24hr PHYTO7 MOI 1 -0.0 -0.3 -0.3 +0.4 -0.8
phage 36hr PHYTO MOI 0.1 +0.2 -0.1 +0.4 -0.3 -1.0
supernatant control Vogels_fungal_media; pH 5.5 -0.5 -0.1 -0.3 -0.5 +0.6
phage 36hr PHYTO8 MOI 10 +0.1 -0.3 -0.2 +0.6 -0.8
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 +0.3 +0.2 +0.3 -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +0.1 +0.5 -0.3 -1.0
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.3 +0.5 -0.2 -0.8
phage 36hr PHYTO1 MOI 10 -0.2 -0.2 -0.1 -0.5 +1.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.3 +0.2 -0.1 +0.4 +1.0
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.1 +0.0 +0.0 +0.4 +1.5
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BPHYT_RS29925
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