Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS29595 and BPHYT_RS29600 are separated by 127 nucleotidesBPHYT_RS29600 and BPHYT_RS29605 are separated by 148 nucleotidesBPHYT_RS29605 and BPHYT_RS29610 are separated by 155 nucleotidesBPHYT_RS29610 and BPHYT_RS29615 are separated by 251 nucleotides BPHYT_RS29595: BPHYT_RS29595 - MFS transporter, at 2,195,127 to 2,196,494 _RS29595 BPHYT_RS29600: BPHYT_RS29600 - threonine aldolase, at 2,196,622 to 2,197,629 _RS29600 BPHYT_RS29605: BPHYT_RS29605 - hypothetical protein, at 2,197,778 to 2,198,563 _RS29605 BPHYT_RS29610: BPHYT_RS29610 - cupin, at 2,198,719 to 2,199,030 _RS29610 BPHYT_RS29615: BPHYT_RS29615 - hypothetical protein, at 2,199,282 to 2,199,602 _RS29615
Group Condition BPHYT_RS29595 BPHYT_RS29600 BPHYT_RS29605 BPHYT_RS29610 BPHYT_RS29615
phage 36hr PHYTO11 MOI 1 -0.3 -0.1 -0.4 -0.9 N.D.
phage 24hr PHYTO6 MOI 0.1 -0.5 +0.1 +0.2 -1.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.1 -0.0 -1.1 -0.3 N.D.
nophagecontrol 36hr Phyto Lib only -0.5 -0.2 +0.3 -0.7 N.D.
nitrogen source Putrescine (N) -0.3 -0.3 -0.7 +0.3 N.D.
phage 24hr PHYTO11 MOI 0.1 -0.5 -0.2 +0.6 -0.8 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.8 -0.3 +0.4 -0.2 N.D.
phage 36hr PHYTO2 MOI 1 -0.4 -0.4 +0.7 -0.6 N.D.
nitrogen source Uridine (N) -0.3 -0.0 -0.9 +0.5 N.D.
vitamin With vitamins t1 +0.3 -0.1 -0.9 +0.2 N.D.
phage 24hr PHYTO2 MOI 1 -0.1 -0.3 +0.9 -0.9 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.2 -0.2 +0.6 -0.5 N.D.
phage 36hr PHYTO4 MOI 1 -0.0 +0.5 +0.2 -0.7 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 +0.1 -0.7 +0.7 N.D.
phage 36hr PHYTO10 MOI 1 -0.0 +0.1 +0.8 -0.7 N.D.
carbon source Sebacic (C) +0.5 +0.1 +0.2 -0.6 N.D.
phage 24hr PHYTO6 MOI 1 +0.2 +0.1 +0.7 -0.7 N.D.
nitrogen source L-Lysine (N) -0.1 +0.3 -0.5 +0.8 N.D.
phage 36hr PHYTO3 MOI 0.1 -0.0 +0.2 +1.2 -0.6 N.D.
phage 36hr PHYTO2 MOI 1 +0.3 +0.2 +0.7 -0.4 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.0 +0.8 -0.4 N.D.
phage 36hr PHYTO8 MOI 10 +0.3 +0.3 +0.7 -0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 +0.1 +1.4 -0.4 N.D.
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.2 +0.4 +0.3 +0.7 N.D.
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days -0.3 +0.2 +0.7 +0.7 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.2 +0.7 +0.4 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.2 +1.0 +0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.1 +0.5 +0.6 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +0.0 +1.1 +0.5 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.4 +0.8 +0.4 N.D.
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BPHYT_RS29600
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