Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS29005 and BPHYT_RS29010 overlap by 4 nucleotidesBPHYT_RS29010 and BPHYT_RS29015 are separated by 136 nucleotidesBPHYT_RS29015 and BPHYT_RS29020 are separated by 113 nucleotidesBPHYT_RS29020 and BPHYT_RS29025 are separated by 410 nucleotides BPHYT_RS29005: BPHYT_RS29005 - transporter, at 2,062,634 to 2,065,765 _RS29005 BPHYT_RS29010: BPHYT_RS29010 - RND transporter, at 2,065,762 to 2,066,724 _RS29010 BPHYT_RS29015: BPHYT_RS29015 - RND transporter, at 2,066,861 to 2,068,432 _RS29015 BPHYT_RS29020: BPHYT_RS29020 - hypothetical protein, at 2,068,546 to 2,068,836 _RS29020 BPHYT_RS29025: BPHYT_RS29025 - hypothetical protein, at 2,069,247 to 2,069,582 _RS29025
Group Condition BPHYT_RS29005 BPHYT_RS29010 BPHYT_RS29015 BPHYT_RS29020 BPHYT_RS29025
phage 36hr PHYTO6 MOI 10 -1.3 N.D. -1.9 -1.6 N.D.
nitrogen source L-Serine (N) -0.1 N.D. -4.6 +0.5 N.D.
phage 36hr PHYTO2 MOI 1 -1.7 N.D. -0.5 -1.8 N.D.
phage 24hr PHYTO1 MOI 10 -1.6 N.D. -2.1 -0.3 N.D.
phage 36hr PHYTO8 MOI 10 +0.2 N.D. -2.9 -1.1 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 N.D. -2.7 -0.4 N.D.
phage 36hr PHYTO10 MOI 10 +0.1 N.D. -2.8 -0.2 N.D.
phage 24hr PHYTO10 MOI 10 -0.8 N.D. -1.4 -0.6 N.D.
phage 36hr PHYTO2 MOI 1 -2.6 N.D. +0.3 -0.4 N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB +0.3 N.D. -2.2 -0.7 N.D.
phage 36hr PHYTO3 MOI 1 -0.3 N.D. -1.1 -1.1 N.D.
phage 24hr PHYTO9 MOI 0.1 -0.4 N.D. -1.8 -0.1 N.D.
phage 36hr PHYTO11 MOI 0.1 +0.1 N.D. -3.1 +0.7 N.D.
phage 36hr PHYTO11 MOI 1 +0.3 N.D. -2.1 -0.5 N.D.
phage 24hr PHYTO6 MOI 0.1 +0.0 N.D. -1.5 -0.8 N.D.
phage P. phyto PHYTO2 MOI 1 +0.2 N.D. -1.3 -1.2 N.D.
phage 24hr PHYTO4 MOI 0.1 -0.2 N.D. -0.9 -1.0 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.5 N.D. -1.0 -0.6 N.D.
phage 24hr PHYTO6 MOI 1 +0.6 N.D. -3.0 +0.4 N.D.
phage 24hr PHYTO MOI 0.1 +0.3 N.D. -2.2 +0.1 N.D.
phage 36hr PHYTO1 MOI 10 -1.1 N.D. -1.1 +0.6 N.D.
nitrogen source L-Phenylalanine (N) -0.5 N.D. -1.4 +0.3 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 N.D. -1.1 +0.4 N.D.
phage 36hr PHYTO8 MOI 10 +0.4 N.D. -1.1 -0.7 N.D.
phage 24hr PHYTO1 MOI 10 +0.8 N.D. -1.1 -0.6 N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.2 N.D. +0.8 -0.2 N.D.
phage 24hr PHYTO4 MOI 10 +1.3 N.D. -0.8 -0.5 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 N.D. +1.3 -0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 N.D. +1.6 -1.4 N.D.
no phage control No phage control -0.2 N.D. +1.5 -0.5 N.D.
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