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Protein
Homologs
Fitness for 5 genes in
Burkholderia phytofirmans PsJN
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
BPHYT_RS28665 and BPHYT_RS28670 are separated by 164 nucleotides
BPHYT_RS28670 and BPHYT_RS28675 are separated by 77 nucleotides
BPHYT_RS28675 and BPHYT_RS28680 are separated by 120 nucleotides
BPHYT_RS28680 and BPHYT_RS28685 are separated by 28 nucleotides
BPHYT_RS28665: BPHYT_RS28665 - IclR family transcriptional regulator, at 1,984,457 to 1,985,272
_RS28665
BPHYT_RS28670: BPHYT_RS28670 - MFS transporter, at 1,985,437 to 1,986,801
_RS28670
BPHYT_RS28675: BPHYT_RS28675 - hypothetical protein, at 1,986,879 to 1,987,544
_RS28675
BPHYT_RS28680: BPHYT_RS28680 - porin, at 1,987,665 to 1,988,180
_RS28680
BPHYT_RS28685: BPHYT_RS28685 - GntR family transcriptional regulator, at 1,988,209 to 1,989,660
_RS28685
Group
Condition
BPHYT
_RS28665
BPHYT
_RS28670
BPHYT
_RS28675
BPHYT
_RS28680
BPHYT
_RS28685
phage
24hr PHYTO4 MOI 10
N.D.
+1.1
-1.3
-1.9
-2.3
phage
P. phyto PHYTO2 MOI 1
N.D.
+0.6
-0.1
-2.6
-0.9
phage
36hr PHYTO10 MOI 10
N.D.
+0.7
-0.7
-2.7
-0.3
phage
36hr PHYTO6 MOI 0.1
N.D.
+1.2
-0.8
-0.6
-2.1
phage
24hr PHYTO MOI 0.1
N.D.
+1.0
-1.2
-1.7
-0.3
phage
36hr PHYTO7 MOI 0.1
N.D.
+1.1
-0.7
-0.7
-1.5
phage
24hr PHYTO6 MOI 0.1
N.D.
+1.1
-0.4
-1.9
-0.6
nophagecontrol
24hr Phyto Lib Only
N.D.
+1.4
-1.5
-1.2
-0.4
nophagecontrol
36hr Phyto Lib Only
N.D.
+1.1
-1.3
-0.9
-0.6
phage
36hr PHYTO2 MOI 1
N.D.
+1.7
+0.8
-0.6
-3.5
phage
36hr PHYTO8 MOI 10
N.D.
+1.5
-0.2
-0.5
-2.2
phage
36hr PHYTO2 MOI 1
N.D.
+1.6
-0.7
-1.3
-1.0
supernatant
Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB
N.D.
-0.3
-0.4
+0.9
-1.6
phage
36hr PHYTO8 MOI 0.1
N.D.
+1.4
-1.4
-0.6
-0.7
phage
24hr PHYTO10 MOI 10
N.D.
+1.1
-1.1
-0.4
-0.8
phage
36hr PHYTO1 MOI 1
N.D.
+1.0
-1.7
-0.3
-0.2
phage
24hr PHYTO3 MOI 1
N.D.
+1.3
-0.4
-1.6
-0.5
phage
36hr PHYTO6 MOI 10
N.D.
+1.3
-1.9
-0.2
-0.2
phage
36hr PHYTO6 MOI 1
N.D.
+1.6
-0.2
-1.2
-1.1
phage
24hr PHYTO3 MOI 10
N.D.
+0.8
+0.8
-2.7
+0.4
phage
36hr PHYTO11 MOI 0.1
N.D.
+1.2
-1.7
+0.0
-0.2
phage
36hr PHYTO4 MOI 1
N.D.
+1.8
-0.3
-0.1
-2.1
phage
36hr PHYTO2 MOI 0.1
N.D.
+1.5
+0.1
-2.2
+0.2
nophagecontrol
36hr Phyto Lib Only
N.D.
+1.5
-0.2
-1.3
-0.2
nophagecontrol
24hr Phyto Lib Only
N.D.
+1.5
-0.6
-0.4
-0.7
phage
36hr PHYTO3 MOI 1
N.D.
+1.7
-0.3
-1.5
-0.1
nophagecontrol
36hr Phyto Lib only
N.D.
+1.5
-0.2
-1.4
+0.3
phage
24hr PHYTO6 MOI 10
N.D.
+2.1
-0.4
-1.5
+0.4
supernatant control
Vogels_fungal_media 0.1X
N.D.
-0.2
+0.4
+1.9
-1.1
phage
36hr PHYTO7 MOI 1
N.D.
+2.1
-0.4
-1.0
+0.4
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