Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS28290 and BPHYT_RS28295 are separated by 59 nucleotidesBPHYT_RS28295 and BPHYT_RS28300 are separated by 811 nucleotidesBPHYT_RS28300 and BPHYT_RS28305 are separated by 262 nucleotidesBPHYT_RS28305 and BPHYT_RS28310 are separated by 226 nucleotides BPHYT_RS28290: BPHYT_RS28290 - hypothetical protein, at 1,903,139 to 1,903,411 _RS28290 BPHYT_RS28295: BPHYT_RS28295 - hypothetical protein, at 1,903,471 to 1,903,788 _RS28295 BPHYT_RS28300: BPHYT_RS28300 - histone nucleoid-structuring protein H-NS, at 1,904,600 to 1,904,902 _RS28300 BPHYT_RS28305: BPHYT_RS28305 - protein tyrosine phosphatase, at 1,905,165 to 1,905,686 _RS28305 BPHYT_RS28310: BPHYT_RS28310 - hypothetical protein, at 1,905,913 to 1,906,113 _RS28310
Group Condition BPHYT_RS28290 BPHYT_RS28295 BPHYT_RS28300 BPHYT_RS28305 BPHYT_RS28310
phage 36hr PHYTO3 MOI 1 N.D. N.D. -1.4 -3.7 N.D.
phage 24hr PHYTO10 MOI 10 N.D. N.D. -2.7 -2.1 N.D.
phage P. phyto PHYTO2 MOI 0.1 N.D. N.D. -0.8 -3.6 N.D.
phage 36hr PHYTO6 MOI 0.1 N.D. N.D. -0.6 -3.7 N.D.
phage 24hr PHYTO3 MOI 0.1 N.D. N.D. -2.9 -1.4 N.D.
phage 24hr PHYTO3 MOI 10 N.D. N.D. -3.1 -1.1 N.D.
nophagecontrol 24hr Phyto Lib Only N.D. N.D. -2.8 -1.4 N.D.
phage 24hr PHYTO8 MOI 1 N.D. N.D. -2.9 -1.2 N.D.
phage 36hr PHYTO11 MOI 1 N.D. N.D. -3.0 -1.0 N.D.
phage 36hr PHYTO2 MOI 1 N.D. N.D. -2.9 -1.0 N.D.
phage P. phyto corn MOI 1 N.D. N.D. -4.0 +0.2 N.D.
phage PHYTO3 MOI 0.1 N.D. N.D. -1.9 -1.9 N.D.
phage 24hr PHYTO11 MOI 0.1 N.D. N.D. -2.9 -0.8 N.D.
supernatant control Vogels_fungal_media; pH 5.5 N.D. N.D. -4.2 +0.7 N.D.
phage 36hr PHYTO8 MOI 10 N.D. N.D. -2.7 -0.7 N.D.
phage 24hr PHYTO2 MOI 0.1 N.D. N.D. -2.9 -0.4 N.D.
phage 24hr PHYTO4 MOI 0.1 N.D. N.D. -2.8 -0.5 N.D.
phage 24hr PHYTO6 MOI 0.1 N.D. N.D. -2.9 -0.3 N.D.
phage 36hr PHYTO3 MOI 1 N.D. N.D. -1.5 -1.6 N.D.
phage 24hr PHYTO2 MOI 0.1 N.D. N.D. -2.8 -0.2 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. N.D. -2.4 -0.6 N.D.
phage 36hr PHYTO8 MOI 10 N.D. N.D. -1.1 -1.9 N.D.
lb_dap plate control and outgrow on gent LB_DAP agar plate, outgrowth in LB_gent N.D. N.D. -2.4 -0.6 N.D.
phage 36hr PHYTO1 MOI 1 N.D. N.D. -2.8 -0.0 N.D.
phage 24hr PHYTO10 MOI 1 N.D. N.D. -0.6 -2.1 N.D.
nophagecontrol 36hr Phyto Lib Only N.D. N.D. -2.8 +0.4 N.D.
phage 36hr PHYTO10 MOI 1 N.D. N.D. +0.3 -2.4 N.D.
phage P. phyto PHYTO2 MOI 1 N.D. N.D. -2.8 +1.0 N.D.
supernatant control Vogels_fungal_media 0.1X N.D. N.D. -1.6 +1.0 N.D.
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days N.D. N.D. -1.6 +1.0 N.D.
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