Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS28130 and BPHYT_RS28135 are separated by 74 nucleotidesBPHYT_RS28135 and BPHYT_RS28140 are separated by 337 nucleotidesBPHYT_RS28140 and BPHYT_RS28145 are separated by 57 nucleotidesBPHYT_RS28145 and BPHYT_RS28150 are separated by 199 nucleotides BPHYT_RS28130: BPHYT_RS28130 - GntR family transcriptional regulator, at 1,869,357 to 1,870,100 _RS28130 BPHYT_RS28135: BPHYT_RS28135 - alcohol dehydrogenase, at 1,870,175 to 1,871,194 _RS28135 BPHYT_RS28140: BPHYT_RS28140 - translation initiation factor SUI1, at 1,871,532 to 1,871,894 _RS28140 BPHYT_RS28145: BPHYT_RS28145 - diguanylate cyclase, at 1,871,952 to 1,873,133 _RS28145 BPHYT_RS28150: BPHYT_RS28150 - methylmalonate-semialdehyde dehydrogenase, at 1,873,333 to 1,874,850 _RS28150
Group Condition BPHYT_RS28130 BPHYT_RS28135 BPHYT_RS28140 BPHYT_RS28145 BPHYT_RS28150
phage 36hr PHYTO2 MOI 1 -1.0 -1.0 -1.2 +0.5 -1.8
phage 36hr PHYTO10 MOI 10 -0.5 -1.2 -1.5 -0.2 +0.5
phage 24hr PHYTO6 MOI 0.1 -0.6 -0.6 -0.7 -0.1 -0.9
phage 24hr PHYTO2 MOI 1 -0.3 -0.6 -0.7 -0.1 -1.3
phage 24hr PHYTO6 MOI 1 -0.0 -1.2 -0.6 +0.1 -0.9
phage 36hr PHYTO6 MOI 1 -0.4 +0.0 -1.5 +0.1 -0.6
phage 36hr PHYTO4 MOI 1 -0.5 -1.3 -0.6 +0.5 -0.3
phage 36hr PHYTO8 MOI 10 -1.0 -0.3 -0.6 +0.1 -0.3
phage 36hr PHYTO10 MOI 1 +0.0 +0.1 -1.2 +0.3 -1.3
phage 36hr PHYTO8 MOI 0.1 -0.8 -0.5 +0.1 +0.4 -1.2
phage 24hr PHYTO3 MOI 10 -0.5 +0.3 -1.0 -0.4 -0.4
nitrogen source L-Isoleucine (N) -0.7 -0.3 +0.3 -1.0 -0.0
nophagecontrol 24hr Phyto Lib Only -0.4 -0.6 -0.6 +0.3 -0.4
phage P. phyto PHYTO2 MOI 1 -1.2 -0.3 -0.8 +0.3 +0.4
phage 36hr PHYTO3 MOI 1 -0.4 -1.0 -0.5 +0.1 +0.3
phage 24hr PHYTO6 MOI 10 -1.1 -0.3 +0.6 -0.1 -0.6
phage 24hr PHYTO11 MOI 0.1 +0.1 -1.2 +0.2 +0.2 -0.6
nophagecontrol 36hr Phyto Lib Only -0.3 -0.8 +0.4 +0.2 -0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.0 +0.5 +0.0 +0.0 -0.6
phage 36hr PHYTO11 MOI 1 -0.4 -0.8 -0.3 -0.1 +0.5
phage 36hr PHYTO2 MOI 1 -0.3 -0.6 -0.5 +0.7 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -0.5 -0.7 +0.5 +0.2
phage P. phyto corn MOI 0.1 +0.5 -0.6 -0.5 +0.1 -0.5
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -0.3 +0.2 +0.8 -0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.3 -1.0 +0.4 +0.3
in planta Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1 +0.2 +0.6 +0.2 -0.8 +0.4
phage 24hr PHYTO1 MOI 10 +0.3 +0.5 -0.8 +0.5 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 +0.2 +0.0 +1.1 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.4 +0.3 +0.8 -0.3 +0.7
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -0.4 +4.2 +0.4 -0.4
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