Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS27975 and BPHYT_RS27980 are separated by 67 nucleotidesBPHYT_RS27980 and BPHYT_RS27985 are separated by 114 nucleotidesBPHYT_RS27985 and BPHYT_RS27990 are separated by 473 nucleotidesBPHYT_RS27990 and BPHYT_RS27995 are separated by 218 nucleotides BPHYT_RS27975: BPHYT_RS27975 - ABC transporter permease, at 1,840,504 to 1,841,460 _RS27975 BPHYT_RS27980: BPHYT_RS27980 - ABC transporter substrate-binding protein, at 1,841,528 to 1,842,859 _RS27980 BPHYT_RS27985: BPHYT_RS27985 - LacI family transcriptional regulator, at 1,842,974 to 1,843,978 _RS27985 BPHYT_RS27990: BPHYT_RS27990 - hypothetical protein, at 1,844,452 to 1,844,763 _RS27990 BPHYT_RS27995: BPHYT_RS27995 - hypothetical protein, at 1,844,982 to 1,845,854 _RS27995
Group Condition BPHYT_RS27975 BPHYT_RS27980 BPHYT_RS27985 BPHYT_RS27990 BPHYT_RS27995
phage 36hr PHYTO2 MOI 1 N.D. -0.6 -0.4 N.D. -2.8
nophagecontrol 36hr Phyto Lib Only N.D. -0.2 -0.4 N.D. -1.7
nophagecontrol 36hr Phyto Lib Only N.D. -0.1 -0.3 N.D. -1.8
phage 24hr PHYTO4 MOI 10 N.D. -1.3 -0.1 N.D. -0.7
phage 24hr PHYTO11 MOI 1 N.D. +0.1 +0.0 N.D. -2.2
phage 36hr PHYTO6 MOI 1 N.D. -0.7 -0.2 N.D. -1.1
phage 24hr PHYTO10 MOI 10 N.D. -0.6 +0.3 N.D. -1.6
phage 36hr PHYTO3 MOI 1 N.D. -0.5 -0.2 N.D. -1.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -1.2 -0.7 N.D. +0.0
phage 36hr PHYTO1 MOI 1 N.D. -0.7 -0.1 N.D. -0.9
phage 36hr PHYTO9 MOI 1 N.D. -0.3 -0.1 N.D. -1.2
nophagecontrol 36hr Phyto Lib only N.D. -0.7 -0.3 N.D. -0.6
phage 24hr PHYTO3 MOI 10 N.D. +0.5 -0.5 N.D. -1.1
phage 36hr PHYTO11 MOI 1 N.D. +0.1 +0.2 N.D. -1.3
phage 24hr PHYTO1 MOI 10 N.D. +0.5 -0.3 N.D. -1.1
phage 24hr PHYTO9 MOI 0.1 N.D. +0.8 -1.2 N.D. -0.5
supernatant control Vogels_fungal_media 0.1X N.D. -1.3 +0.4 N.D. -0.0
phage 36hr PHYTO8 MOI 10 N.D. +0.4 +0.1 N.D. -1.4
phage 36hr PHYTO2 MOI 1 N.D. +1.3 +0.1 N.D. -2.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB N.D. -0.9 +0.5 N.D. -0.3
nophagecontrol 24hr Phyto Lib only N.D. +0.7 -0.2 N.D. -1.1
temperature LB, 37C N.D. +0.9 -0.1 N.D. -0.9
phage 24hr PHYTO6 MOI 10 N.D. +1.2 -0.7 N.D. -0.7
phage 24hr PHYTO6 MOI 1 N.D. +0.5 +0.4 N.D. -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. -0.5 -0.5 N.D. +1.1
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days N.D. -0.9 +0.7 N.D. +0.5
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days N.D. +0.4 +0.9 N.D. -0.6
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days N.D. +0.1 +1.6 N.D. -0.9
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days N.D. -0.6 +1.2 N.D. +0.2
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days N.D. +0.3 +1.0 N.D. +0.5
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BPHYT_RS27975
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BPHYT_RS27980
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