Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS27865	BPHYT_RS27870	BPHYT_RS27875	BPHYT_RS27880	BPHYT_RS27890
phage	P. phyto PHYTO2 MOI 1	-0.3	N.D.	+0.1	-0.0	-3.5
replicable vector efficiency	Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50	+0.1	N.D.	-0.1	-0.0	-3.7
phage	24hr PHYTO9 MOI 0.1	-0.9	N.D.	+0.6	-0.1	-2.9
phage	36hr PHYTO10 MOI 1	-0.1	N.D.	-2.4	-0.1	+1.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+2.2	N.D.	-1.3	-0.4	-1.5
phage	36hr PHYTO8 MOI 0.1	-0.5	N.D.	-1.5	-0.2	+1.7
phage	36hr PHYTO2 MOI 1	+0.1	N.D.	-2.1	-0.1	+2.6
phage	36hr PHYTO6 MOI 10	-1.2	N.D.	-0.5	+0.1	+2.2
phage	36hr PHYTO6 MOI 0.1	-1.0	N.D.	-0.6	-0.1	+2.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+2.5	N.D.	-0.2	-0.1	-1.2
in planta	Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days	+2.4	N.D.	-0.0	+0.4	-1.4
phage	36hr PHYTO4 MOI 1	-1.0	N.D.	+0.9	-0.2	+1.7
nophagecontrol	24hr Phyto Lib Only	-0.6	N.D.	+0.6	-0.6	+2.0
in planta	Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+2.5	N.D.	-0.1	+0.4	-1.1
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+3.7	N.D.	-0.7	-0.1	-0.9
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+3.5	N.D.	-0.1	-0.2	-0.7
phage	24hr PHYTO1 MOI 10	-0.3	N.D.	-0.7	+0.1	+3.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	+3.2	N.D.	-0.4	+0.0	-0.1
phage	24hr PHYTO6 MOI 10	-0.2	N.D.	+0.1	-0.2	+3.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+3.8	N.D.	-0.5	-0.2	+0.2
in planta	Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days	+5.3	N.D.	-0.7	+0.2	-1.2
in planta	Plant=switchgrass; PreTreatment=None; PlantTreatment=low_phosphate; Sample=rhizosphere; GrowthSubstrate=Agar_0.5%; Collection=LB_with_kan50; Time=21days	+5.6	N.D.	-1.1	-0.0	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days	+4.7	N.D.	-0.0	+0.2	-0.5
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+6.3	N.D.	+0.3	+0.3	-1.0
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	+5.6	N.D.	-0.1	-0.1	+1.0
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+5.8	N.D.	+0.1	+0.3	+0.6
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+7.1	N.D.	-0.3	+0.2	+0.1
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	+5.9	N.D.	+0.3	-0.0	+1.2
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	+7.1	N.D.	+0.1	+0.1	+1.9
in planta	Rhizosphere from sorghum RTx_430 plants, grown 2 months, low phosphate; Rep 1	+8.8	N.D.	+1.6	-0.4	-0.6