Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS27740 and BPHYT_RS27745 are separated by 297 nucleotidesBPHYT_RS27745 and BPHYT_RS27750 are separated by 413 nucleotidesBPHYT_RS27750 and BPHYT_RS27755 overlap by 23 nucleotidesBPHYT_RS27755 and BPHYT_RS27760 overlap by 4 nucleotides BPHYT_RS27740: BPHYT_RS27740 - hypothetical protein, at 1,785,985 to 1,786,260 _RS27740 BPHYT_RS27745: BPHYT_RS27745 - nitroreductase, at 1,786,558 to 1,787,229 _RS27745 BPHYT_RS27750: BPHYT_RS27750 - RND transporter, at 1,787,643 to 1,789,139 _RS27750 BPHYT_RS27755: BPHYT_RS27755 - glycosyl hydrolase family 18, at 1,789,117 to 1,790,202 _RS27755 BPHYT_RS27760: BPHYT_RS27760 - ABC transporter, at 1,790,199 to 1,790,897 _RS27760
Group Condition BPHYT_RS27740 BPHYT_RS27745 BPHYT_RS27750 BPHYT_RS27755 BPHYT_RS27760
phage 24hr PHYTO10 MOI 10 N.D. -0.3 -0.5 -0.7 -1.8
phage 24hr PHYTO4 MOI 10 N.D. -0.3 -0.3 -0.8 -1.8
phage 24hr PHYTO1 MOI 1 N.D. -0.5 -0.2 -0.4 -1.3
phage 36hr PHYTO3 MOI 1 N.D. -0.2 -0.4 -0.2 -1.5
phage 24hr PHYTO11 MOI 1 N.D. -0.5 +0.0 -1.0 -0.7
phage 24hr PHYTO6 MOI 0.1 N.D. -0.3 +0.3 -0.6 -1.6
phage 36hr PHYTO7 MOI 0.1 N.D. -0.4 -0.3 -0.7 -0.8
carbon source Suberic (C) N.D. -0.3 -0.2 -0.4 -1.2
phage 24hr PHYTO MOI 0.1 N.D. +0.2 -0.4 -0.4 -1.5
phage 36hr PHYTO4 MOI 1 N.D. +0.0 -0.5 -0.8 -0.7
phage 36hr PHYTO10 MOI 1 N.D. -0.6 -0.3 -0.6 -0.4
phage 24hr PHYTO10 MOI 10 N.D. -0.6 -0.3 -0.6 -0.4
phage 36hr PHYTO6 MOI 0.1 N.D. -0.4 -0.3 -0.2 -1.0
phage 36hr PHYTO9 MOI 1 N.D. +0.1 -0.2 +0.1 -1.8
phage 24hr PHYTO2 MOI 0.1 N.D. -0.2 -0.2 -0.3 -1.2
phage 36hr PHYTO10 MOI 10 N.D. -0.0 -0.4 -0.6 -0.9
phage 36hr PHYTO6 MOI 10 N.D. +0.2 -0.1 -0.6 -1.2
phage P. phyto PHYTO2 MOI 0.1 N.D. -0.3 +0.2 -0.2 -1.5
phage 36hr PHYTO1 MOI 10 N.D. +0.1 -0.3 -0.4 -1.1
phage 36hr PHYTO9 MOI 0.1 N.D. +0.2 -0.3 -0.9 -0.4
carbon source Azelaic (C) N.D. -0.2 -0.5 +0.3 -1.0
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days N.D. +0.3 -0.4 -0.1 -1.2
phage 24hr PHYTO9 MOI 0.1 N.D. -0.2 +0.3 -0.0 -1.4
phage 24hr PHYTO6 MOI 1 N.D. +0.5 -0.3 -0.6 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant N.D. +0.7 +0.1 -0.5 -0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. +0.3 -0.6 +1.0 -0.7
carbon source Malonic (C) N.D. +0.2 +0.4 +0.8 -1.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=20h_outgrowth_LB; Time=7_days N.D. -0.4 +0.2 +1.0 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. -0.2 +0.4 -0.2 +1.3
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.4 -0.2 +0.1 +1.2
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