Fitness for 5 genes in Burkholderia phytofirmans PsJN

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	BPHYT_RS26775	BPHYT_RS26780	BPHYT_RS26785	BPHYT_RS26790	BPHYT_RS26795
lb_dap plate control and outgrow on gent	LB_DAP agar plate, outgrowth in LB_gent	-3.0	+0.4	-1.2	-0.2	-0.6
carbon source	2-Deoxy-D-ribonic lithium salt (C)	-2.6	-0.0	-0.6	-0.0	+0.1
carbon source	D-Glucose (C)	-3.0	+0.3	-0.5	+0.0	+0.2
supernatant control	Vogels_fungal_media 0.1X	-2.4	+0.4	-0.4	-0.1	-0.0
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-1.2	-0.1	-0.4	-0.3	-0.5
in planta	Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days	-1.6	+0.2	-0.3	-0.3	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-1.8	+0.4	-0.2	-0.0	+0.1
phage	36hr PHYTO7 MOI 0.1	-1.5	+0.6	-0.1	+0.0	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.8	+0.0	+0.5	-0.1	-0.0
carbon source	D-Glucose 20 mM (C)	-1.4	+0.2	-0.6	+0.2	+0.2
phage	36hr PHYTO1 MOI 10	+0.1	+0.6	-1.0	-0.3	-0.6
phage	36hr PHYTO7 MOI 1	-1.7	+0.6	+0.2	-0.2	-0.0
phage	24hr PHYTO3 MOI 10	-1.2	+1.0	-0.2	-0.4	-0.4
phage	24hr PHYTO10 MOI 1	-2.0	+0.9	+0.1	-0.1	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	-0.8	+0.5	-0.5	+0.2	-0.2
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB	-1.3	+1.0	-0.1	-0.1	+0.0
phage	24hr PHYTO6 MOI 10	-0.9	+0.8	-0.1	+0.2	-0.3
phage	36hr PHYTO11 MOI 0.1	-0.7	+1.0	-0.3	-0.1	-0.2
phage	36hr PHYTO MOI 0.1	-1.0	+0.9	+0.1	-0.3	+0.2
phage	36hr PHYTO9 MOI 1	-1.3	+1.0	-0.1	-0.1	+0.3
phage	24hr PHYTO4 MOI 10	+0.4	+1.0	-0.2	-0.3	-0.6
nitrogen source	L-Asparagine (N)	+1.8	-0.3	-0.2	-0.1	+0.0
phage	24hr PHYTO7 MOI 10	+1.2	+0.4	+0.2	-0.2	-0.4
phage	36hr PHYTO11 MOI 1	+1.2	+1.1	-0.1	-0.1	-0.6
phage	36hr PHYTO3 MOI 1	+0.9	+1.0	-0.2	+0.2	-0.2
phage	24hr PHYTO2 MOI 0.1	+1.0	+1.0	+0.1	+0.0	-0.3
nophagecontrol	24hr Phyto Lib only	+1.1	+0.7	+0.3	-0.3	+0.1
nitrogen source	L-Isoleucine (N)	+2.0	+0.2	+0.0	-0.2	-0.0
phage	36hr PHYTO11 MOI 0.1	+0.7	+1.1	-0.0	+0.3	+0.3
phage	36hr PHYTO2 MOI 1	+1.6	+1.2	+0.4	-0.7	+0.3