Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS26340 and BPHYT_RS26345 are separated by 481 nucleotidesBPHYT_RS26345 and BPHYT_RS26350 are separated by 155 nucleotidesBPHYT_RS26350 and BPHYT_RS26355 are separated by 51 nucleotidesBPHYT_RS26355 and BPHYT_RS26360 are separated by 199 nucleotides BPHYT_RS26340: BPHYT_RS26340 - cupin, at 1,483,570 to 1,484,115 _RS26340 BPHYT_RS26345: BPHYT_RS26345 - hypothetical protein, at 1,484,597 to 1,484,857 _RS26345 BPHYT_RS26350: BPHYT_RS26350 - hypothetical protein, at 1,485,013 to 1,485,249 _RS26350 BPHYT_RS26355: BPHYT_RS26355 - hypothetical protein, at 1,485,301 to 1,485,546 _RS26355 BPHYT_RS26360: BPHYT_RS26360 - hypothetical protein, at 1,485,746 to 1,485,943 _RS26360
Group Condition BPHYT_RS26340 BPHYT_RS26345 BPHYT_RS26350 BPHYT_RS26355 BPHYT_RS26360
carbon source 2-Deoxy-D-ribonic lithium salt (C) -1.7 N.D. N.D. -1.8 N.D.
phage 36hr PHYTO1 MOI 1 -1.1 N.D. N.D. -2.4 N.D.
phage 36hr PHYTO11 MOI 1 -0.7 N.D. N.D. -2.6 N.D.
phage 36hr PHYTO11 MOI 1 -0.5 N.D. N.D. -2.6 N.D.
phage 24hr PHYTO2 MOI 0.1 -1.9 N.D. N.D. -1.1 N.D.
phage 24hr PHYTO3 MOI 1 -0.4 N.D. N.D. -2.4 N.D.
phage 36hr PHYTO3 MOI 0.1 -1.6 N.D. N.D. -1.2 N.D.
motility outer cut, LB soft agar motility assay -0.8 N.D. N.D. -1.9 N.D.
temperature LB, 37C -1.2 N.D. N.D. -1.5 N.D.
phage 24hr PHYTO6 MOI 10 -0.5 N.D. N.D. -2.3 N.D.
nophagecontrol 36hr Phyto Lib only -0.2 N.D. N.D. -2.4 N.D.
phage 36hr PHYTO11 MOI 0.1 +0.0 N.D. N.D. -2.6 N.D.
phage 36hr PHYTO8 MOI 10 -1.7 N.D. N.D. -0.8 N.D.
phage 36hr PHYTO MOI 0.1 -0.6 N.D. N.D. -1.7 N.D.
phage 36hr PHYTO2 MOI 1 -1.0 N.D. N.D. -1.3 N.D.
phage 36hr PHYTO6 MOI 0.1 -1.0 N.D. N.D. -1.1 N.D.
phage 36hr PHYTO6 MOI 0.1 -0.5 N.D. N.D. -1.7 N.D.
stress Bacitracin 0.25 mg/ml -0.5 N.D. N.D. -1.6 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 N.D. N.D. -2.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=15_days -0.4 N.D. N.D. -1.6 N.D.
phage 36hr PHYTO3 MOI 1 -0.3 N.D. N.D. -1.7 N.D.
carbon source Phenylacetic 5 mM (C) -0.1 N.D. N.D. -1.9 N.D.
carbon source Tween 20 (C) -0.1 N.D. N.D. -1.9 N.D.
phage 36hr PHYTO2 MOI 1 -0.3 N.D. N.D. -1.6 N.D.
phage 36hr PHYTO6 MOI 1 -0.3 N.D. N.D. -1.6 N.D.
phage 36hr PHYTO8 MOI 10 +0.5 N.D. N.D. -2.3 N.D.
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.3 N.D. N.D. -2.0 N.D.
nitrogen source Putrescine (N) +0.2 N.D. N.D. -1.8 N.D.
phage P. phyto PHYTO2 MOI 1 -1.2 N.D. N.D. +1.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.2 N.D. N.D. +1.7 N.D.
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