Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS25350 and BPHYT_RS25355 are separated by 91 nucleotidesBPHYT_RS25355 and BPHYT_RS25360 are separated by 184 nucleotidesBPHYT_RS25360 and BPHYT_RS25365 are separated by 27 nucleotidesBPHYT_RS25365 and BPHYT_RS25370 are separated by 26 nucleotides BPHYT_RS25350: BPHYT_RS25350 - AMP-dependent synthetase and ligase, at 1,262,532 to 1,264,232 _RS25350 BPHYT_RS25355: BPHYT_RS25355 - LuxR family transcriptional regulator, at 1,264,324 to 1,267,026 _RS25355 BPHYT_RS25360: BPHYT_RS25360 - enoyl-CoA hydratase, at 1,267,211 to 1,267,981 _RS25360 BPHYT_RS25365: BPHYT_RS25365 - thiolase, at 1,268,009 to 1,269,250 _RS25365 BPHYT_RS25370: BPHYT_RS25370 - acyl-CoA dehydrogenase, at 1,269,277 to 1,270,419 _RS25370
Group Condition BPHYT_RS25350 BPHYT_RS25355 BPHYT_RS25360 BPHYT_RS25365 BPHYT_RS25370
phage 24hr PHYTO6 MOI 1 -0.1 -0.2 N.D. N.D. -2.7
phage 24hr PHYTO MOI 0.1 -0.1 -0.0 N.D. N.D. -2.7
nophagecontrol 36hr Phyto Lib only +0.6 -0.3 N.D. N.D. -2.7
phage 36hr PHYTO11 MOI 0.1 -0.3 -0.7 N.D. N.D. -1.3
phage 24hr PHYTO3 MOI 10 +0.2 -0.3 N.D. N.D. -2.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.6 +0.2 N.D. N.D. -1.6
vitamin No vitamins t2 -0.4 -0.2 N.D. N.D. -1.3
phage 24hr PHYTO6 MOI 0.1 +0.0 -0.1 N.D. N.D. -1.8
phage 24hr PHYTO4 MOI 0.1 -0.1 -0.5 N.D. N.D. -1.1
phage 24hr PHYTO2 MOI 0.1 +0.1 +0.0 N.D. N.D. -1.9
phage 36hr PHYTO8 MOI 10 -0.0 -0.7 N.D. N.D. -1.0
nophagecontrol 36hr Phyto Lib only +0.1 +0.0 N.D. N.D. -1.7
phage 36hr PHYTO6 MOI 1 +0.3 -0.4 N.D. N.D. -1.3
phage 36hr PHYTO6 MOI 0.1 +0.2 -0.4 N.D. N.D. -1.2
carbon source D-Glucose (C) -0.2 +0.3 N.D. N.D. -1.4
phage 36hr PHYTO7 MOI 0.1 +0.3 -0.7 N.D. N.D. -0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 -0.2 N.D. N.D. -1.2
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 +0.2 N.D. N.D. -1.4
phage 36hr PHYTO1 MOI 1 +0.4 -0.0 N.D. N.D. -1.3
phage 36hr PHYTO2 MOI 1 +0.3 -1.2 N.D. N.D. +0.3
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 -0.3 N.D. N.D. -0.9
phage 36hr PHYTO4 MOI 1 -0.3 -0.3 N.D. N.D. +1.1
phage 24hr PHYTO11 MOI 0.1 -0.1 -0.2 N.D. N.D. +1.4
phage 24hr PHYTO7 MOI 10 -0.1 -0.2 N.D. N.D. +1.6
supernatant control Vogels_fungal_media 0.1X +0.2 +0.3 N.D. N.D. +1.2
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.5 +0.6 N.D. N.D. +0.7
phage 24hr PHYTO9 MOI 10 +0.4 +0.2 N.D. N.D. +1.2
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2 +0.3 N.D. N.D. +0.3
supernatant control Vogels_fungal_media; pH 5.5 +0.5 +0.3 N.D. N.D. +1.1
in planta Plant=Arabidopsis_thaliana_col0; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_1.5%agar; Collection=outgrowth_LB; Time=7_days +0.4 +0.4 N.D. N.D. +1.3
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