Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS24810 and BPHYT_RS24815 are separated by 12 nucleotidesBPHYT_RS24815 and BPHYT_RS24820 overlap by 17 nucleotidesBPHYT_RS24820 and BPHYT_RS24825 are separated by 3 nucleotidesBPHYT_RS24825 and BPHYT_RS24830 overlap by 4 nucleotides BPHYT_RS24810: BPHYT_RS24810 - hypothetical protein, at 1,135,133 to 1,135,741 _RS24810 BPHYT_RS24815: BPHYT_RS24815 - cob(II)yrinic acid a,c-diamide reductase, at 1,135,754 to 1,136,413 _RS24815 BPHYT_RS24820: BPHYT_RS24820 - cobyrinic acid a,c-diamide synthase, at 1,136,397 to 1,137,695 _RS24820 BPHYT_RS24825: BPHYT_RS24825 - cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase, at 1,137,699 to 1,138,301 _RS24825 BPHYT_RS24830: BPHYT_RS24830 - cobalamin biosynthesis protein CbiG, at 1,138,298 to 1,138,786 _RS24830
Group Condition BPHYT_RS24810 BPHYT_RS24815 BPHYT_RS24820 BPHYT_RS24825 BPHYT_RS24830
vitamin No vitamins t2 -0.4 N.D. -1.6 N.D. N.D.
phage 36hr PHYTO6 MOI 10 -1.4 N.D. -0.2 N.D. N.D.
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 1X -0.2 N.D. -1.2 N.D. N.D.
supernatant control Vogels_fungal_media 0.1X -0.4 N.D. -1.0 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.5 N.D. -0.9 N.D. N.D.
supernatant control Vogels_fungal_media 0.1X -0.1 N.D. -1.2 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 N.D. -0.5 N.D. N.D.
nitrogen source NAG (N) -0.6 N.D. -0.6 N.D. N.D.
phage 36hr PHYTO7 MOI 1 -0.2 N.D. -1.0 N.D. N.D.
phage 24hr PHYTO2 MOI 1 -0.1 N.D. -1.0 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 N.D. -0.3 N.D. N.D.
carbon source L-Tryptophan (C) -0.2 N.D. -0.9 N.D. N.D.
phage P. phyto PHYTO2 MOI 1 -1.0 N.D. -0.1 N.D. N.D.
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 N.D. -0.5 N.D. N.D.
phage 24hr PHYTO1 MOI 1 -0.1 N.D. -0.9 N.D. N.D.
nitrogen source L-Asparagine (N) -0.1 N.D. -0.9 N.D. N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 N.D. -1.0 N.D. N.D.
supernatant control:fungal media R2A with Vogels_fungal_media 0.8X +0.3 N.D. -0.8 N.D. N.D.
nitrogen source L-Glutamic (N) +0.6 N.D. -0.9 N.D. N.D.
nophagecontrol 24hr Phyto Lib Only -0.6 N.D. +0.4 N.D. N.D.
in planta Plant=Arabidopsis_thaliana_FLS2; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_0.8%agar; Collection=outgrowth_LB; Time=7_days +0.4 N.D. -0.6 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 N.D. -0.5 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.8 N.D. -0.6 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.6 N.D. -0.4 N.D. N.D.
phage 36hr PHYTO10 MOI 10 -0.3 N.D. +0.7 N.D. N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.7 N.D. -0.4 N.D. N.D.
replicable vector efficiency Conjugation on LB_DAP agar plate with WM3064 carrying pBBR1-MCS5; outgrowth in LB_gent50 +0.8 N.D. -0.3 N.D. N.D.
phage 24hr PHYTO7 MOI 10 +0.7 N.D. +0.3 N.D. N.D.
phage 36hr PHYTO9 MOI 1 +0.3 N.D. +0.7 N.D. N.D.
phage 36hr PHYTO2 MOI 1 +0.3 N.D. +0.9 N.D. N.D.
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