Fitness for 5 genes in Burkholderia phytofirmans PsJN

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500 ntBPHYT_RS24550 and BPHYT_RS24555 are separated by 374 nucleotidesBPHYT_RS24555 and BPHYT_RS24560 are separated by 45 nucleotidesBPHYT_RS24560 and BPHYT_RS24565 are separated by 183 nucleotidesBPHYT_RS24565 and BPHYT_RS24570 are separated by 547 nucleotides BPHYT_RS24550: BPHYT_RS24550 - hypothetical protein, at 1,078,378 to 1,078,659 _RS24550 BPHYT_RS24555: BPHYT_RS24555 - membrane protein, at 1,079,034 to 1,080,116 _RS24555 BPHYT_RS24560: BPHYT_RS24560 - esterase, at 1,080,162 to 1,081,049 _RS24560 BPHYT_RS24565: BPHYT_RS24565 - membrane protein, at 1,081,233 to 1,082,342 _RS24565 BPHYT_RS24570: BPHYT_RS24570 - membrane protein, at 1,082,890 to 1,084,050 _RS24570
Group Condition BPHYT_RS24550 BPHYT_RS24555 BPHYT_RS24560 BPHYT_RS24565 BPHYT_RS24570
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 0.5X; growth supplemented with 0.4X LB -1.8 N.D. -0.1 -0.9 -0.3
motility outer cut, LB soft agar motility assay -0.8 N.D. -0.3 -2.4 +0.4
nophagecontrol 24hr Phyto Lib only -0.2 N.D. +0.2 -2.5 -0.1
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X; growth supplemented with 0.4X LB -0.5 N.D. -0.3 -1.1 -0.4
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.5X; growth supplemented with 0.4X LB -1.2 N.D. -0.2 -0.5 -0.3
phage 36hr PHYTO8 MOI 10 -1.5 N.D. +0.5 -1.0 -0.1
motility inner cut, LB soft agar motility assay -0.5 N.D. -0.3 -1.2 -0.1
phage PHYTO3 MOI 0.1 -0.0 N.D. -0.3 -1.8 +0.2
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.8X; growth supplemented with 0.4X LB -0.8 N.D. -0.1 -1.1 +0.2
phage 24hr PHYTO7 MOI 1 +0.1 N.D. +0.2 -2.3 +0.2
phage 36hr PHYTO4 MOI 0.1 -0.9 N.D. +0.3 -0.9 +0.2
carbon source Phenylacetic 5 mM (C) -2.1 N.D. +0.3 +0.6 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.8 N.D. -0.1 -1.8 +0.4
phage 24hr PHYTO8 MOI 1 +0.5 N.D. +0.4 -1.1 -0.4
phage 36hr PHYTO3 MOI 1 +0.7 N.D. +0.3 -1.1 +0.1
phage 24hr PHYTO4 MOI 0.1 +0.6 N.D. +0.3 -1.1 +0.2
phage 36hr PHYTO10 MOI 10 +1.1 N.D. +0.1 -0.7 +0.2
phage 36hr PHYTO8 MOI 10 +0.7 N.D. +0.5 -0.7 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 N.D. -0.0 +1.5 +0.1
phage 36hr PHYTO9 MOI 0.1 +0.7 N.D. +0.5 -0.5 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 N.D. -0.3 +2.0 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 N.D. -0.1 +1.7 +0.2
phage 36hr PHYTO4 MOI 1 +1.0 N.D. +0.9 -0.3 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 N.D. -0.1 +1.5 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 N.D. -0.0 +1.4 +0.4
phage 36hr PHYTO11 MOI 0.1 +0.7 N.D. +0.5 +0.5 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 N.D. -0.2 +2.0 +0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 N.D. -0.2 +2.2 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 N.D. -0.2 +2.7 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 N.D. +0.2 +2.0 +0.2
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